RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RHODO00212 210 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 FAM74A4Q5TZK3 123 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 Q6ZSN1 163 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 SLC25A29Q8N8R3 303 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 TSKUQ8WUA8 353 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 MSRB1Q9NZV6 116 aa17.02■□□□□ 0.32
VEGFA-209ENST00000425836 A0A096LPF7 62 aa17.02■□□□□ 0.31
VEGFA-209ENST00000425836 FOXA3P55318 350 aaPredicted RBP17.02■□□□□ 0.31
VEGFA-209ENST00000425836 WDR73Q6P4I2 378 aa17.02■□□□□ 0.31
VEGFA-209ENST00000425836 TRBV6-4A0A1B0GX49 114 aa17.01■□□□□ 0.31
VEGFA-209ENST00000425836 CNFNQ9BYD5 112 aa17.01■□□□□ 0.31
VEGFA-209ENST00000425836 LYSTQ99698 3801 aa17.01■□□□□ 0.31
VEGFA-209ENST00000425836 P0DMU3 169 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 FAM231AP0DMU4 169 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 FAM231CP0DMU5 169 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 GYPEP15421 78 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 NTF3P20783 257 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 GFRA4Q9GZZ7 299 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 ICOSQ9Y6W8 199 aa17■□□□□ 0.31
VEGFA-209ENST00000425836 VPS13DQ5THJ4 4388 aa16.99■□□□□ 0.31
VEGFA-209ENST00000425836 ADCYAP1P18509 176 aa16.99■□□□□ 0.31
VEGFA-209ENST00000425836 C14orf178Q8N769 122 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-209ENST00000425836 PGLYRP4Q96LB8 373 aa16.99■□□□□ 0.31
VEGFA-209ENST00000425836 LOC100131303A0A0U1RQF7 123 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 K7EQD1 137 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 AP1S3Q96PC3 154 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 NACAE9PAV3 2078 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 FAM231BA6NCW3 169 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 PNRC1Q12796 327 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-209ENST00000425836 RHOHQ15669 191 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 MRPL23Q16540 153 aaKnown RBP16.98■□□□□ 0.31
VEGFA-209ENST00000425836 PRADC1Q9BSG0 188 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 KIF25-AS1Q9Y6Z4 181 aa16.98■□□□□ 0.31
VEGFA-209ENST00000425836 HIGD1CA8MV81 97 aa16.97■□□□□ 0.31
VEGFA-209ENST00000425836 F8W036 122 aa16.97■□□□□ 0.31
VEGFA-209ENST00000425836 LINC00315P59091 139 aa16.95■□□□□ 0.3
VEGFA-209ENST00000425836 TWIST1Q15672 202 aa16.95■□□□□ 0.3
VEGFA-209ENST00000425836 SMIM17P0DL12 118 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 ESRGQ1W209 222 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 RNF212Q495C1 297 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 TRGC1P0CF51 173 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 EVI2AP22794 236 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 SRIP30626 198 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 CCL18P55774 89 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 UBE2DNLQ8IWF7 75 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 SEC11CQ9BY50 192 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 Q9UF83 564 aa16.94■□□□□ 0.3
VEGFA-209ENST00000425836 RAB4BP61018 213 aa16.93■□□□□ 0.3
VEGFA-209ENST00000425836 ZNF56Q15929 161 aa16.93■□□□□ 0.3
VEGFA-209ENST00000425836 LINC00588Q9Y4M8 146 aa16.93■□□□□ 0.3
VEGFA-209ENST00000425836 SMIM27A0A1W2PRY6 76 aa16.92■□□□□ 0.3
VEGFA-209ENST00000425836 NEGR1Q7Z3B1 354 aa16.92■□□□□ 0.3
VEGFA-209ENST00000425836 NUP35Q8NFH5 326 aa16.92■□□□□ 0.3
VEGFA-209ENST00000425836 BORCS7Q96B45 105 aa16.91■□□□□ 0.3
VEGFA-209ENST00000425836 NAT8BQ9UHF3 227 aa16.91■□□□□ 0.3
VEGFA-209ENST00000425836 A0A1B0GUT8 65 aa16.9■□□□□ 0.3
VEGFA-209ENST00000425836 F5H697 171 aa16.9■□□□□ 0.3
VEGFA-209ENST00000425836 PPP1R2P9O14990 202 aa16.9■□□□□ 0.3
VEGFA-209ENST00000425836 RYR2Q92736 4967 aa16.9■□□□□ 0.3
VEGFA-209ENST00000425836 DPH3P1Q9H4G8 78 aa16.89■□□□□ 0.3
VEGFA-209ENST00000425836 HYDINQ4G0P3 5121 aa16.89■□□□□ 0.29
VEGFA-209ENST00000425836 MT-ND4LP03901 98 aa16.89■□□□□ 0.29
VEGFA-209ENST00000425836 C10orf91Q5T1B1 145 aa16.89■□□□□ 0.29
VEGFA-209ENST00000425836 LYPD5Q6UWN5 251 aa16.89■□□□□ 0.29
VEGFA-209ENST00000425836 SH2D6Q7Z4S9 175 aa16.89■□□□□ 0.29
VEGFA-209ENST00000425836 GAGE12JA6NER3 117 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 MGPP08493 103 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 GAGE1Q13065 139 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 GAGE4Q13068 117 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 GAGE5Q13069 117 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 GAGE13Q4V321 117 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 ANAPC16Q96DE5 110 aa16.88■□□□□ 0.29
VEGFA-209ENST00000425836 TRBV10-1A0A0K0K1A3 114 aa16.87■□□□□ 0.29
VEGFA-209ENST00000425836 LINC00694P0DN24 101 aa16.87■□□□□ 0.29
VEGFA-209ENST00000425836 FAM3BP58499 235 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-209ENST00000425836 RYR3Q15413 4870 aa16.86■□□□□ 0.29
VEGFA-209ENST00000425836 SMIM15Q7Z3B0 74 aa16.85■□□□□ 0.29
VEGFA-209ENST00000425836 MRPS16Q9Y3D3 137 aaKnown RBP16.85■□□□□ 0.29
VEGFA-209ENST00000425836 RIGQ13278 110 aa16.85■□□□□ 0.29
VEGFA-209ENST00000425836 SUMO4Q6EEV6 95 aa16.85■□□□□ 0.29
VEGFA-209ENST00000425836 ATP6V0E2Q8NHE4 81 aa16.85■□□□□ 0.29
VEGFA-209ENST00000425836 ZNRF2Q8NHG8 242 aa16.85■□□□□ 0.29
VEGFA-209ENST00000425836 CARHSP1Q9Y2V2 147 aaKnown RBP16.85■□□□□ 0.29
VEGFA-209ENST00000425836 M0QY20 66 aa16.83■□□□□ 0.28
VEGFA-209ENST00000425836 NEXN-AS1Q8NBZ9 246 aa16.83■□□□□ 0.28
VEGFA-209ENST00000425836 UPK3BQ9BT76 320 aa16.83■□□□□ 0.28
VEGFA-209ENST00000425836 TIRAPP58753 221 aa16.82■□□□□ 0.28
VEGFA-209ENST00000425836 RPL36AP83881 106 aaKnown RBP16.82■□□□□ 0.28
VEGFA-209ENST00000425836 RPL36ALQ969Q0 106 aaKnown RBP16.82■□□□□ 0.28
VEGFA-209ENST00000425836 KMT2AQ03164 3969 aa16.82■□□□□ 0.28
VEGFA-209ENST00000425836 TMEM191AQ9H0A3 160 aa16.81■□□□□ 0.28
VEGFA-209ENST00000425836 TRBV7-3A0A075B6L6 115 aa16.81■□□□□ 0.28
VEGFA-209ENST00000425836 H7C1H1 209 aa16.8■□□□□ 0.28
VEGFA-209ENST00000425836 UBE2D3P61077 147 aa16.8■□□□□ 0.28
VEGFA-209ENST00000425836 UBE2D2P62837 147 aa16.8■□□□□ 0.28
VEGFA-209ENST00000425836 GTSF1LQ9H1H1 148 aa16.8■□□□□ 0.28
VEGFA-209ENST00000425836 Q9H8V8 135 aa16.8■□□□□ 0.28
VEGFA-209ENST00000425836 IGLV2-18A0A075B6J9 118 aa16.79■□□□□ 0.28
VEGFA-209ENST00000425836 NDUFA5Q16718 116 aa16.78■□□□□ 0.28
VEGFA-209ENST00000425836 GATD1Q8NB37 220 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms