RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 MANBALQ9NQG1 85 aa12.36□□□□□ -0.43
SMARCAL1-205ENST00000425815 PHLDA3Q9Y5J5 127 aa12.36□□□□□ -0.43
SMARCAL1-205ENST00000425815 A0A087WWL8 130 aa12.35□□□□□ -0.43
SMARCAL1-205ENST00000425815 M0R381 172 aa12.35□□□□□ -0.43
SMARCAL1-205ENST00000425815 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
SMARCAL1-205ENST00000425815 NFE4Q86UQ8 179 aa12.35□□□□□ -0.43
SMARCAL1-205ENST00000425815 ABCA13Q86UQ4 5058 aa12.34□□□□□ -0.43
SMARCAL1-205ENST00000425815 IGLV2-8P01709 118 aa12.34□□□□□ -0.43
SMARCAL1-205ENST00000425815 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
SMARCAL1-205ENST00000425815 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-205ENST00000425815 hCG_2014768A0A024R1R8 64 aa12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 TRAV8-6A0A0B4J262 113 aa12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 CXCL1P09341 107 aa12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 FUSP35637 526 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 ZFP82Q8N141 532 aa12.33□□□□□ -0.44
SMARCAL1-205ENST00000425815 IBA57-AS1B1ANH7 110 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 RHODO00212 210 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 SNAI2O43623 268 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 PRR27Q6MZM9 219 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
SMARCAL1-205ENST00000425815 A0A087WTM6 91 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 AKAP14Q86UN6 197 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 Q8N3U1 123 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 KRTAP4-5Q9BYR2 181 aa12.31□□□□□ -0.44
SMARCAL1-205ENST00000425815 MUC21A0A0G2JKD1 596 aa12.3□□□□□ -0.44
SMARCAL1-205ENST00000425815 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
SMARCAL1-205ENST00000425815 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
SMARCAL1-205ENST00000425815 CENPWQ5EE01 88 aa12.3□□□□□ -0.44
SMARCAL1-205ENST00000425815 TEX46H3BTG2 121 aa12.29□□□□□ -0.44
SMARCAL1-205ENST00000425815 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
SMARCAL1-205ENST00000425815 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
SMARCAL1-205ENST00000425815 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
SMARCAL1-205ENST00000425815 C19orf71A6NCJ1 209 aa12.28□□□□□ -0.44
SMARCAL1-205ENST00000425815 BCL2P10415 239 aa12.28□□□□□ -0.44
SMARCAL1-205ENST00000425815 ERVFC1-1P60608 527 aa12.28□□□□□ -0.44
SMARCAL1-205ENST00000425815 PGPEP1Q9NXJ5 209 aa12.28□□□□□ -0.44
SMARCAL1-205ENST00000425815 LRCOL1A6NCL2 159 aa12.27□□□□□ -0.45
SMARCAL1-205ENST00000425815 PDE6DO43924 150 aa12.27□□□□□ -0.45
SMARCAL1-205ENST00000425815 VAX2Q9UIW0 290 aa12.27□□□□□ -0.45
SMARCAL1-205ENST00000425815 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
SMARCAL1-205ENST00000425815 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
SMARCAL1-205ENST00000425815 GZMBP10144 247 aa12.26□□□□□ -0.45
SMARCAL1-205ENST00000425815 MED9Q9NWA0 146 aa12.26□□□□□ -0.45
SMARCAL1-205ENST00000425815 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
SMARCAL1-205ENST00000425815 A0A1B0GVG6 124 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 IFNA1P01562 189 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 GNG4P50150 75 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 RAB4BP61018 213 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 UBE2D3P61077 147 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 SSTP61278 116 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 UBE2D2P62837 147 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
SMARCAL1-205ENST00000425815 A0A087WWC5 75 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 RBFOX3A6NFN3 312 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 EREGO14944 169 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 SPANXN1Q5VSR9 72 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 ALKAL2Q6UX46 152 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 Q9HAA7 133 aa12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
SMARCAL1-205ENST00000425815 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
SMARCAL1-205ENST00000425815 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
SMARCAL1-205ENST00000425815 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
SMARCAL1-205ENST00000425815 LYPD6BQ8NI32 183 aa12.23□□□□□ -0.45
SMARCAL1-205ENST00000425815 DAZAP1Q96EP5 407 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-205ENST00000425815 NKX2-5P52952 324 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-205ENST00000425815 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-205ENST00000425815 LAGE3Q14657 143 aa12.22□□□□□ -0.45
SMARCAL1-205ENST00000425815 NIT1Q86X76 327 aa12.22□□□□□ -0.45
SMARCAL1-205ENST00000425815 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-205ENST00000425815 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-205ENST00000425815 CDPF1Q6NVV7 123 aa12.21□□□□□ -0.45
SMARCAL1-205ENST00000425815 KRTAP10-1P60331 282 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 RPS20P60866 119 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 ZNF56Q15929 161 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 FER1L6-AS1Q8NA97 138 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 NUDT10Q8NFP7 164 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 NUDT11Q96G61 164 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
SMARCAL1-205ENST00000425815 K7EN84 100 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 PSCAO43653 123 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 P01737 135 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
SMARCAL1-205ENST00000425815 DNAH8Q96JB1 4490 aa12.18□□□□□ -0.46
SMARCAL1-205ENST00000425815 XGP55808 180 aa12.18□□□□□ -0.46
SMARCAL1-205ENST00000425815 WFDC2Q14508 124 aa12.18□□□□□ -0.46
SMARCAL1-205ENST00000425815 F5H697 171 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms