RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 RIGQ13278 110 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 FHL2Q14192 279 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 TWIST1Q15672 202 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 CASC10Q5T4H9 136 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 HHLA3Q9XRX5 114 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 A0A1B0GW15 77 aa16.95■□□□□ 0.3
APOE-202ENST00000425718 IMMP2LQ96T52 175 aa16.95■□□□□ 0.3
APOE-202ENST00000425718 TMEM242Q9NWH2 141 aa16.95■□□□□ 0.3
APOE-202ENST00000425718 MUC21A0A0G2JKD1 596 aa16.94■□□□□ 0.3
APOE-202ENST00000425718 MUC21A0A140T8X8 626 aa16.94■□□□□ 0.3
APOE-202ENST00000425718 APOC3P02656 99 aa16.94■□□□□ 0.3
APOE-202ENST00000425718 HOXA5P20719 270 aa16.94■□□□□ 0.3
APOE-202ENST00000425718 NUP35Q8NFH5 326 aa16.94■□□□□ 0.3
APOE-202ENST00000425718 A0A087WWC5 75 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 TRBV6-4A0A1B0GX49 114 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 PAX4O43316 350 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 S100A8P05109 93 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 GATA1P15976 413 aaPredicted RBP16.93■□□□□ 0.3
APOE-202ENST00000425718 FAM74A4Q5TZK3 123 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 TMEM88Q6PEY1 159 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 SLC7A5P1Q8MH63 180 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 CLRN3Q8NCR9 226 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 PRADC1Q9BSG0 188 aa16.93■□□□□ 0.3
APOE-202ENST00000425718 TRAV26-1A0A087WT03 109 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 CRYGDP07320 174 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 CRYBA4P53673 196 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 SSTP61278 116 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 RHOHQ15669 191 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 KCNIP4Q6PIL6 250 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 DPH3P1Q9H4G8 78 aa16.92■□□□□ 0.3
APOE-202ENST00000425718 RAB4BP61018 213 aa16.91■□□□□ 0.3
APOE-202ENST00000425718 UFSP1Q6NVU6 142 aa16.91■□□□□ 0.3
APOE-202ENST00000425718 JPT2Q9H910 190 aa16.91■□□□□ 0.3
APOE-202ENST00000425718 A0A087WWL8 130 aa16.9■□□□□ 0.3
APOE-202ENST00000425718 ATP5L2Q7Z4Y8 100 aa16.9■□□□□ 0.3
APOE-202ENST00000425718 C14orf178Q8N769 122 aaPredicted RBP16.9■□□□□ 0.3
APOE-202ENST00000425718 TRAV9-1A0A075B6T8 112 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 C7orf77A4D0Y5 90 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 S100PP25815 95 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 SH2D6Q7Z4S9 175 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 SAMD10Q9BYL1 202 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 CSMD3Q7Z407 3707 aa16.89■□□□□ 0.29
APOE-202ENST00000425718 IGHV3-73A0A0B4J1V6 119 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 H7C1H1 209 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 ZNF56Q15929 161 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 RPS10P5Q9NQ39 176 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 MSRB1Q9NZV6 116 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 ICOSQ9Y6W8 199 aa16.88■□□□□ 0.29
APOE-202ENST00000425718 A0A0J9YY99 117 aa16.87■□□□□ 0.29
APOE-202ENST00000425718 K7EQD1 137 aa16.87■□□□□ 0.29
APOE-202ENST00000425718 MRPL23Q16540 153 aaKnown RBP16.87■□□□□ 0.29
APOE-202ENST00000425718 FRZBQ92765 325 aa16.87■□□□□ 0.29
APOE-202ENST00000425718 TRBV10-1A0A0K0K1A3 114 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 F5H697 171 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 EVI2AP22794 236 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 SLC25A29Q8N8R3 303 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 BTF3L4Q96K17 158 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 TMEM191AQ9H0A3 160 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 KIF25-AS1Q9Y6Z4 181 aa16.86■□□□□ 0.29
APOE-202ENST00000425718 DYNC2H1Q8NCM8 4307 aaKnown RBP16.85■□□□□ 0.29
APOE-202ENST00000425718 NUDT3O95989 172 aa16.85■□□□□ 0.29
APOE-202ENST00000425718 VSIG2Q96IQ7 327 aa16.85■□□□□ 0.29
APOE-202ENST00000425718 APLNQ9ULZ1 77 aa16.85■□□□□ 0.29
APOE-202ENST00000425718 MGPP08493 103 aa16.84■□□□□ 0.29
APOE-202ENST00000425718 HBBP68871 147 aa16.84■□□□□ 0.29
APOE-202ENST00000425718 GYPEP15421 78 aa16.83■□□□□ 0.28
APOE-202ENST00000425718 SRIP30626 198 aa16.83■□□□□ 0.28
APOE-202ENST00000425718 STARD9Q9P2P6 4700 aa16.83■□□□□ 0.28
APOE-202ENST00000425718 FAM3BP58499 235 aaPredicted RBP16.82■□□□□ 0.28
APOE-202ENST00000425718 RASL11AQ6T310 242 aa16.82■□□□□ 0.28
APOE-202ENST00000425718 P0DMU3 169 aa16.81■□□□□ 0.28
APOE-202ENST00000425718 FAM231AP0DMU4 169 aa16.81■□□□□ 0.28
APOE-202ENST00000425718 FAM231CP0DMU5 169 aa16.81■□□□□ 0.28
APOE-202ENST00000425718 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.81■□□□□ 0.28
APOE-202ENST00000425718 LINC00315P59091 139 aa16.8■□□□□ 0.28
APOE-202ENST00000425718 RPL36AP83881 106 aaKnown RBP16.8■□□□□ 0.28
APOE-202ENST00000425718 MRPL54Q6P161 138 aaKnown RBP16.8■□□□□ 0.28
APOE-202ENST00000425718 NEGR1Q7Z3B1 354 aa16.8■□□□□ 0.28
APOE-202ENST00000425718 RPL36ALQ969Q0 106 aaKnown RBP16.8■□□□□ 0.28
APOE-202ENST00000425718 TENM2Q9NT68 2774 aa16.8■□□□□ 0.28
APOE-202ENST00000425718 A0A1B0GXF2 115 aa16.79■□□□□ 0.28
APOE-202ENST00000425718 CAMPP49913 170 aa16.79■□□□□ 0.28
APOE-202ENST00000425718 DNAJC30Q96LL9 226 aa16.79■□□□□ 0.28
APOE-202ENST00000425718 A0A096LPF7 62 aa16.78■□□□□ 0.28
APOE-202ENST00000425718 CCL18P55774 89 aa16.78■□□□□ 0.28
APOE-202ENST00000425718 COX19Q49B96 90 aa16.78■□□□□ 0.28
APOE-202ENST00000425718 Q6ZSN1 163 aa16.78■□□□□ 0.28
APOE-202ENST00000425718 GATD1Q8NB37 220 aa16.78■□□□□ 0.28
APOE-202ENST00000425718 SUMO4Q6EEV6 95 aa16.77■□□□□ 0.28
APOE-202ENST00000425718 MRAP2Q96G30 205 aa16.77■□□□□ 0.28
APOE-202ENST00000425718 TRBV7-3A0A075B6L6 115 aa16.76■□□□□ 0.27
APOE-202ENST00000425718 PPP1R17O96001 155 aa16.76■□□□□ 0.27
APOE-202ENST00000425718 M0QY20 66 aa16.75■□□□□ 0.27
APOE-202ENST00000425718 LGALS9CQ6DKI2 356 aa16.75■□□□□ 0.27
APOE-202ENST00000425718 FAM104BQ5XKR9 115 aa16.74■□□□□ 0.27
APOE-202ENST00000425718 TNFRSF18Q9Y5U5 241 aa16.74■□□□□ 0.27
APOE-202ENST00000425718 RAB4AP20338 218 aa16.73■□□□□ 0.27
APOE-202ENST00000425718 TIRAPP58753 221 aa16.73■□□□□ 0.27
APOE-202ENST00000425718 UBE2DNLQ8IWF7 75 aa16.73■□□□□ 0.27
APOE-202ENST00000425718 ATP6V0E2Q8NHE4 81 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms