RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 SDK2Q58EX2 2172 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 BRCA2P51587 3418 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 DMDP11532 3685 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IGHV3OR15-7A0A075B7D8 119 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IGKV1D-43A0A0B4J1Z2 117 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IGKV1D-13A0A0B4J2D9 117 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LOC107984156A0A0G2JMH3 177 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 MYMXA0A1B0GTQ4 84 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 TEX50A0A1B0GTY4 177 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 A0A1B0GXF2 115 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 A0A1W2PQD3 144 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 SMIM27A0A1W2PRY6 76 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 C5orf49A4QMS7 147 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IZUMO1RA6ND01 250 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LINC01549A6NIU2 74 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 KNCNA6PVL3 124 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LINC01619G3V211 115 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 CCL16O15467 120 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 SCGB1C2P0DMR2 95 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IGKV1-13P0DP09 117 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 IGHV1-2P23083 117 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 RPS27P42677 84 aaKnown RBP0.72□□□□□ -2.29
PMS1-210ENST00000424307 SPINT3P49223 89 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 FXYD7P58549 80 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 NPC2P61916 151 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 RPL30P62888 115 aaKnown RBP0.72□□□□□ -2.29
PMS1-210ENST00000424307 CACNG7P62955 275 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 RBM3P98179 157 aaKnown RBP0.72□□□□□ -2.29
PMS1-210ENST00000424307 ARFRP1Q13795 201 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LGALS9BQ3B8N2 356 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LGALS9CQ6DKI2 356 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 SOSTDC1Q6X4U4 206 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 C6orf201Q7Z4U5 140 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 C5orf38Q86SI9 138 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 WDR86Q86TI4 376 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 MDP1Q86V88 176 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LYPD6Q86Y78 171 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 ARL17AQ8IVW1 177 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 Q8N2B8 174 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 PFN4Q8NHR9 129 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 NT5CQ8TCD5 201 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 FXYD5Q96DB9 178 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 SMIM14Q96QK8 99 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 NMNAT3Q96T66 252 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 TRGV9Q99603 122 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 PRSS27Q9BQR3 290 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 TM2D3Q9BRN9 247 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 RTL8AQ9BWD3 113 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 Q9H3A6 140 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 SPANXCQ9NY87 97 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 TAS2R4Q9NYW5 299 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 KLK12Q9UKR0 248 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 ANAPC10Q9UM13 185 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 LHFPL6Q9Y693 200 aa0.72□□□□□ -2.29
PMS1-210ENST00000424307 MUC4Q99102 2169 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 COL4A1P02462 1669 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 DSCAMO60469 2012 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 SVILO95425 2214 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 SSC5DA1L4H1 1573 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 ARFGEF3Q5TH69 2177 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 COL4A6Q14031 1691 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 TNRC6CQ9HCJ0 1690 aaKnown RBP0.71□□□□□ -2.3
PMS1-210ENST00000424307 IGLV8-61A0A075B6I0 122 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 IGHV1OR21-1A0A087WYE8 117 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 SMIM26A0A096LP01 95 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 TRBV7-1A0A0A6YYK4 115 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 A0A0G2JRQ6 117 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 CTXND1A0A1B0GTU2 59 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 UBE2L5PA0A1B0GUS4 154 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 PINLYPA6NC86 204 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 FAM223BA6NKX1 122 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 E7EUB6 86 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 HMGN4O00479 90 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 PEX7O00628 323 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 TIMM17BO60830 172 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 NPYP01303 97 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 IGLV2-8P01709 118 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 IGHV3-23P01764 117 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 BGLAPP02818 100 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 IL4P05112 153 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 OR5AL1P0C617 328 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 PIRTP0C851 137 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 RNASE2P10153 161 aaKnown RBP0.71□□□□□ -2.3
PMS1-210ENST00000424307 CRYGSP22914 178 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 FCER1GP30273 86 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 UBE2D1P51668 147 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 SMIM11AP58511 58 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 FGF12P61328 243 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 QRFPP83859 136 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 SERF2P84101 59 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 S100A7L2Q5SY68 101 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 LINC01590Q5TEZ4 76 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 C1orf140Q5VVS0 124 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 C2orf66Q6UXQ4 117 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 LINC00305Q7Z4B0 112 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 ATP5L2Q7Z4Y8 100 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 FAM19A3Q7Z5A8 133 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 KTN1-AS1Q86SY8 53 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 MARCH3Q86UD3 253 aa0.71□□□□□ -2.3
PMS1-210ENST00000424307 OR5AS1Q8N127 324 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms