RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
PTPRN-204ENST00000423636 SUMO2P61956 95 aaKnown RBP8.86□□□□□ -0.99
PTPRN-204ENST00000423636 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
PTPRN-204ENST00000423636 MAPKAPK5-AS1Q8N8E1 139 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 MYOZ3Q8TDC0 251 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 SCGB3A1Q96QR1 104 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 IGLV2-18A0A075B6J9 118 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 Q8N8P6 123 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 CNFNQ9BYD5 112 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 YAE1D1Q9NRH1 226 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 XCL2Q9UBD3 114 aa8.86□□□□□ -0.99
PTPRN-204ENST00000423636 COX8AP10176 69 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
PTPRN-204ENST00000423636 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 DSCR9P59020 149 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 ZNF876PQ49A33 203 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 KRTAP1-3Q8IUG1 177 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
PTPRN-204ENST00000423636 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 LGALS1P09382 135 aaKnown RBP8.85□□□□□ -0.99
PTPRN-204ENST00000423636 PLA2G2AP14555 144 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 SUMO4Q6EEV6 95 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 CEMP1Q6PRD7 247 aaPredicted RBP8.85□□□□□ -0.99
PTPRN-204ENST00000423636 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
PTPRN-204ENST00000423636 ANK3Q12955 4377 aaKnown RBP8.84□□□□□ -0.99
PTPRN-204ENST00000423636 A0A0J9YX75 114 aa8.84□□□□□ -0.99
PTPRN-204ENST00000423636 TAX1BP3O14907 124 aa8.84□□□□□ -0.99
PTPRN-204ENST00000423636 CD300EQ496F6 205 aaPredicted RBP8.84□□□□□ -0.99
PTPRN-204ENST00000423636 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
PTPRN-204ENST00000423636 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
PTPRN-204ENST00000423636 COX11Q9Y6N1 276 aa8.84□□□□□ -0.99
PTPRN-204ENST00000423636 IGKCP01834 107 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 PPBPP02775 128 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 CD28P10747 220 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 FGF6P10767 208 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 GATA3P23771 443 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 RIPPLY3P57055 190 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 MTURNQ8N3F0 131 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 IGHV3-53P01767 116 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 HHLA3Q9XRX5 114 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 K7EQG2 157 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 KLK9Q2XQG4 91 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 LGALS9BQ3B8N2 356 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 AP1S3Q96PC3 154 aa8.83□□□□□ -1
PTPRN-204ENST00000423636 RBMY1BA6NDE4 496 aaKnown RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 RBMY1EA6NEQ0 496 aaKnown RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 H3BUT2 72 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 RBMY1DP0C7P1 496 aaKnown RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 NSUN5P1Q3KNT7 163 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 TMEM97Q5BJF2 176 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 Q6ZSV7 163 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 TP53TG1Q9Y2A0 90 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 H3BUA1 57 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 CDKN1BP46527 198 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 OR1N2Q8NGR9 330 aa8.82□□□□□ -1
PTPRN-204ENST00000423636 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
PTPRN-204ENST00000423636 SDHAF1A6NFY7 115 aa8.81□□□□□ -1
PTPRN-204ENST00000423636 KLLNB2CW77 178 aa8.81□□□□□ -1
PTPRN-204ENST00000423636 CITED2Q99967 270 aaPredicted RBP8.81□□□□□ -1
PTPRN-204ENST00000423636 FXYD2P54710 66 aa8.81□□□□□ -1
PTPRN-204ENST00000423636 MRPL16Q9NX20 251 aaKnown RBP8.81□□□□□ -1
PTPRN-204ENST00000423636 FBN1P35555 2871 aaKnown RBP8.81□□□□□ -1
PTPRN-204ENST00000423636 DPM2O94777 84 aa8.8□□□□□ -1
PTPRN-204ENST00000423636 ARL6IP6Q8N6S5 226 aa8.8□□□□□ -1
PTPRN-204ENST00000423636 FAM19A4Q96LR4 140 aa8.8□□□□□ -1
PTPRN-204ENST00000423636 NSD1Q96L73 2696 aaPredicted RBP8.8□□□□□ -1
PTPRN-204ENST00000423636 IGHV1OR15-1A0A075B7D0 117 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 AZU1P20160 251 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 LINC00315P59091 139 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 LINC01587Q99440 93 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 Q6ZSN1 163 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 OR9G4Q8NGQ1 327 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 NHP2Q9NX24 153 aaKnown RBP8.79□□□□□ -1
PTPRN-204ENST00000423636 ZNF580Q9UK33 172 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 CHTOPQ9Y3Y2 248 aaKnown RBP8.79□□□□□ -1
PTPRN-204ENST00000423636 LINC01619G3V211 115 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 CYSLTR1Q9Y271 337 aa8.79□□□□□ -1
PTPRN-204ENST00000423636 F8P00451 2351 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 ADARB2-AS1A8MUL3 147 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 J3QLI3 93 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 K7EMT4 169 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 RPL35AP18077 110 aaKnown RBP8.78□□□□□ -1
PTPRN-204ENST00000423636 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
PTPRN-204ENST00000423636 RAX2Q96IS3 184 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 KMT2BQ9UMN6 2715 aaPredicted RBP8.78□□□□□ -1
PTPRN-204ENST00000423636 STAB1Q9NY15 2570 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 TRBV25-1A0A075B6N4 114 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 ELANEP08246 267 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 BAALCQ8WXS3 180 aa8.78□□□□□ -1
PTPRN-204ENST00000423636 COTL1Q14019 142 aa8.77□□□□□ -1
PTPRN-204ENST00000423636 MORN3Q6PF18 240 aaPredicted RBP8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms