RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	EIF5A	P63241	154 aa	Known RBP	11.9	□□□□□ -0.5
HDLBP-208	ENST00000422080	LAGE3	Q14657	143 aa		11.9	□□□□□ -0.5
HDLBP-208	ENST00000422080	C14orf178	Q8N769	122 aa	Predicted RBP	11.9	□□□□□ -0.5
HDLBP-208	ENST00000422080	SFRP2	Q96HF1	295 aa		11.9	□□□□□ -0.5
HDLBP-208	ENST00000422080		A0A087WWC5	75 aa		11.89	□□□□□ -0.51
HDLBP-208	ENST00000422080	KRTAP10-1	P60331	282 aa		11.89	□□□□□ -0.51
HDLBP-208	ENST00000422080		Q9UF83	564 aa		11.89	□□□□□ -0.51
HDLBP-208	ENST00000422080	TMSB15B	A0A087X1C1	80 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080	PFDN1	O60925	122 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080	H2AFB1	P0C5Y9	115 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080	XG	P55808	180 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080	ZFP82	Q8N141	532 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080	TM2D2	Q9BX73	214 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080		Q9HAA7	133 aa		11.88	□□□□□ -0.51
HDLBP-208	ENST00000422080		M0R381	172 aa		11.87	□□□□□ -0.51
HDLBP-208	ENST00000422080	GCSH	P23434	173 aa		11.87	□□□□□ -0.51
HDLBP-208	ENST00000422080	FAM74A4	Q5TZK3	123 aa		11.87	□□□□□ -0.51
HDLBP-208	ENST00000422080	NTN5	Q8WTR8	489 aa	Predicted RBP	11.87	□□□□□ -0.51
HDLBP-208	ENST00000422080	MLST8	Q9BVC4	326 aa		11.87	□□□□□ -0.51
HDLBP-208	ENST00000422080		A0A087WWL8	130 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080		A0A1B0GV50	99 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080	SCO2	A0A1W2PP80	73 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080	CXCL1	P09341	107 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080	TMUB2	Q71RG4	321 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080	BAGE2	Q86Y30	109 aa		11.86	□□□□□ -0.51
HDLBP-208	ENST00000422080	TRAV8-3	A0A0A6YYJ7	113 aa		11.85	□□□□□ -0.51
HDLBP-208	ENST00000422080	TRBV10-1	A0A0K0K1A3	114 aa		11.85	□□□□□ -0.51
HDLBP-208	ENST00000422080	IGLV5-52	A0A0A0MRZ9	124 aa		11.84	□□□□□ -0.51
HDLBP-208	ENST00000422080	TOR2A	Q5JU69	321 aa		11.84	□□□□□ -0.51
HDLBP-208	ENST00000422080		Q8N3U1	123 aa		11.84	□□□□□ -0.51
HDLBP-208	ENST00000422080		Q8N814	137 aa		11.84	□□□□□ -0.51
HDLBP-208	ENST00000422080	EPM2A	B3EWF7	344 aa		11.83	□□□□□ -0.52
HDLBP-208	ENST00000422080	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.83	□□□□□ -0.52
HDLBP-208	ENST00000422080	TRAV1-1	A0A0B4J248	108 aa		11.82	□□□□□ -0.52
HDLBP-208	ENST00000422080	RAB5C	P51148	216 aa		11.82	□□□□□ -0.52
HDLBP-208	ENST00000422080	DAZ4	Q86SG3	579 aa	Known RBP	11.82	□□□□□ -0.52
HDLBP-208	ENST00000422080	MANBAL	Q9NQG1	85 aa		11.82	□□□□□ -0.52
HDLBP-208	ENST00000422080	DAZ3	Q9NR90	486 aa	Known RBP	11.82	□□□□□ -0.52
HDLBP-208	ENST00000422080	FAT1	Q14517	4588 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	TRBV7-3	A0A075B6L6	115 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	SNAI2	O43623	268 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	RAB4B	P61018	213 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	RPL36A	P83881	106 aa	Known RBP	11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	RPL19	P84098	196 aa	Known RBP	11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	EIF5AL1	Q6IS14	154 aa	Known RBP	11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	NIT1	Q86X76	327 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	OR10G8	Q8NGN5	311 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	RPL36AL	Q969Q0	106 aa	Known RBP	11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	URGCP-MRPS24	S4R325	110 aa		11.81	□□□□□ -0.52
HDLBP-208	ENST00000422080	OR5AL1	P0C617	328 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	RPL35	P42766	123 aa	Known RBP	11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	UBE2D3	P61077	147 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	UBE2D2	P62837	147 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	CCL20	P78556	96 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	OR10AG1	Q8NH19	301 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	C11orf52	Q96A22	123 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	COX11	Q9Y6N1	276 aa		11.8	□□□□□ -0.52
HDLBP-208	ENST00000422080	TMEM70	Q9BUB7	260 aa		11.79	□□□□□ -0.52
HDLBP-208	ENST00000422080	CHCHD7	Q9BUK0	85 aa		11.79	□□□□□ -0.52
HDLBP-208	ENST00000422080	GNG13	Q9P2W3	67 aa		11.79	□□□□□ -0.52
HDLBP-208	ENST00000422080	TEX46	H3BTG2	121 aa		11.78	□□□□□ -0.52
HDLBP-208	ENST00000422080	PRR27	Q6MZM9	219 aa		11.78	□□□□□ -0.52
HDLBP-208	ENST00000422080	RMI2	Q96E14	147 aa		11.78	□□□□□ -0.52
HDLBP-208	ENST00000422080	ELOB	Q15370	118 aa		11.77	□□□□□ -0.53
HDLBP-208	ENST00000422080	SPANXN1	Q5VSR9	72 aa		11.77	□□□□□ -0.53
HDLBP-208	ENST00000422080	FRZB	Q92765	325 aa		11.77	□□□□□ -0.53
HDLBP-208	ENST00000422080	DNAH8	Q96JB1	4490 aa		11.77	□□□□□ -0.53
HDLBP-208	ENST00000422080		A0A087WX48	190 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	C1QB	P02746	253 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	SULT1A2	P50226	295 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	WFDC2	Q14508	124 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	KCNIP4	Q6PIL6	250 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	TCTE3	Q8IZS6	198 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	NEXN-AS1	Q8NBZ9	246 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	KLK12	Q9UKR0	248 aa		11.76	□□□□□ -0.53
HDLBP-208	ENST00000422080	ZNF56	Q15929	161 aa		11.75	□□□□□ -0.53
HDLBP-208	ENST00000422080		Q5VSD8	79 aa		11.75	□□□□□ -0.53
HDLBP-208	ENST00000422080	DERL1	Q9BUN8	251 aa		11.75	□□□□□ -0.53
HDLBP-208	ENST00000422080	VPS13B	Q7Z7G8	4022 aa		11.75	□□□□□ -0.53
HDLBP-208	ENST00000422080	TRBV6-8	A0A0A6YYG3	113 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	MUC21	A0A0G2JKD1	596 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	MUC21	A0A140T8X8	626 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	CENPW	Q5EE01	88 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	DAZAP1	Q96EP5	407 aa	Known RBP	11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	SMIM12	Q96EX1	92 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080	KIF25-AS1	Q9Y6Z4	181 aa		11.74	□□□□□ -0.53
HDLBP-208	ENST00000422080		F5H697	171 aa		11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	PDE6D	O43924	150 aa		11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	IGLV2-8	P01709	118 aa		11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	SMIM17	P0DL12	118 aa		11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	RPS20	P60866	119 aa	Known RBP	11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	BAALC	Q8WXS3	180 aa		11.73	□□□□□ -0.53
HDLBP-208	ENST00000422080	IGKV2D-24	A0A075B6R9	120 aa		11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	RBFOX3	A6NFN3	312 aa		11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	TMEM262	E9PQX1	116 aa		11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	LECT2	O14960	151 aa		11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	SMR3B	P02814	79 aa	Predicted RBP	11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	INAFM2	P0DMQ5	153 aa		11.72	□□□□□ -0.53
HDLBP-208	ENST00000422080	SST	P61278	116 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms