RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 SCGB3A1Q96QR1 104 aa16.35■□□□□ 0.21
LEMD2-202ENST00000421671 TRAV26-2A0A0B4J265 109 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 BRI3O95415 125 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 PRADC1Q9BSG0 188 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 C11orf21Q9P2W6 132 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.34■□□□□ 0.213e-8■■■■□ 19.7
LEMD2-202ENST00000421671 ZNF815PA8K554 130 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 CD7P09564 240 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 SCGB1D4Q6XE38 83 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 TEX29Q8N6K0 151 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 TOMM6Q96B49 74 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 SMIM2Q9BVW6 85 aa16.34■□□□□ 0.21
LEMD2-202ENST00000421671 IGHV4-4A0A075B6R2 117 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 A8MWV9 139 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 B4DSR2 109 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 IGHV3-11P01762 117 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 GPHB5Q86YW7 130 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 C20orf173Q96LM9 149 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 UFC1Q9Y3C8 167 aa16.33■□□□□ 0.2
LEMD2-202ENST00000421671 H3BUA1 57 aa16.32■□□□□ 0.2
LEMD2-202ENST00000421671 NDUFA4O00483 81 aa16.32■□□□□ 0.2
LEMD2-202ENST00000421671 KRTAP10-9P60411 292 aa16.32■□□□□ 0.2
LEMD2-202ENST00000421671 C9orf47Q6ZRZ4 202 aa16.32■□□□□ 0.2
LEMD2-202ENST00000421671 MAPK1IP1LQ8NDC0 245 aa16.32■□□□□ 0.2
LEMD2-202ENST00000421671 IGHV7-4-1A0A0J9YVY3 117 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 COX6B1P14854 86 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 SFTA2Q6UW10 78 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 USMG5Q96IX5 58 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 C16orf92Q96LL3 132 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 SS18L2Q9UHA2 77 aa16.31■□□□□ 0.2
LEMD2-202ENST00000421671 TCL1BO95988 128 aa16.3■□□□□ 0.2
LEMD2-202ENST00000421671 PF4V1P10720 104 aa16.3■□□□□ 0.2
LEMD2-202ENST00000421671 Q6ZQT7 251 aa16.3■□□□□ 0.2
LEMD2-202ENST00000421671 NDUFA11Q86Y39 141 aa16.3■□□□□ 0.2
LEMD2-202ENST00000421671 CSPG4Q6UVK1 2322 aa16.3■□□□□ 0.2
LEMD2-202ENST00000421671 ANKRD17O75179 2603 aaKnown RBP16.3■□□□□ 0.2
LEMD2-202ENST00000421671 PTPN13Q12923 2485 aa16.29■□□□□ 0.2
LEMD2-202ENST00000421671 IGLV1-40P01703 118 aa16.29■□□□□ 0.2
LEMD2-202ENST00000421671 SPANXN1Q5VSR9 72 aa16.29■□□□□ 0.2
LEMD2-202ENST00000421671 PLEKHB2Q96CS7 222 aa16.29■□□□□ 0.2
LEMD2-202ENST00000421671 USP9YO00507 2555 aaPredicted RBP16.29■□□□□ 0.2
LEMD2-202ENST00000421671 ABCA12Q86UK0 2595 aa16.29■□□□□ 0.2
LEMD2-202ENST00000421671 CFHR3Q02985 330 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 C9orf139Q6ZV77 190 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 CITED1Q99966 193 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 A0A096LNT2 108 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 SOCS3O14543 225 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 DSCR9P59020 149 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 BAALCQ8WXS3 180 aa16.28■□□□□ 0.2
LEMD2-202ENST00000421671 SRD5A1P18405 259 aa16.27■□□□□ 0.2
LEMD2-202ENST00000421671 PRR9Q5T870 116 aa16.27■□□□□ 0.2
LEMD2-202ENST00000421671 ZANQ9Y493 2812 aa16.27■□□□□ 0.19
LEMD2-202ENST00000421671 ANKRD29Q8N6D5 301 aa16.26■□□□□ 0.19
LEMD2-202ENST00000421671 M0QXV9 152 aa16.25■□□□□ 0.19
LEMD2-202ENST00000421671 SUMO2P61956 95 aaKnown RBP16.25■□□□□ 0.19
LEMD2-202ENST00000421671 TMEM95Q3KNT9 176 aa16.25■□□□□ 0.19
LEMD2-202ENST00000421671 RASL10AQ92737 203 aa16.25■□□□□ 0.19
LEMD2-202ENST00000421671 H3BVH4 76 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 ASIPP42127 132 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 DEFB1P60022 68 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 B5MCH6 92 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 RHODO00212 210 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 DEFB112Q30KQ8 113 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 C10orf126Q8N4M7 172 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 NBPF19A0A087WUL8 3843 aa16.24■□□□□ 0.19
LEMD2-202ENST00000421671 A0A0J9YY99 117 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 IGHV4-59P01825 116 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 NHLRC4P0CG21 123 aaPredicted RBP16.23■□□□□ 0.19
LEMD2-202ENST00000421671 C2orf66Q6UXQ4 117 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 LINC01356Q8N9X3 169 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 KIR2DL4Q99706 377 aa16.23■□□□□ 0.19
LEMD2-202ENST00000421671 CFC1BP0CG36 223 aa16.22■□□□□ 0.19
LEMD2-202ENST00000421671 CFC1P0CG37 223 aa16.22■□□□□ 0.19
LEMD2-202ENST00000421671 SCGB1C2P0DMR2 95 aa16.22■□□□□ 0.19
LEMD2-202ENST00000421671 CHD6Q8TD26 2715 aa16.21■□□□□ 0.19
LEMD2-202ENST00000421671 EDN2P20800 178 aa16.21■□□□□ 0.19
LEMD2-202ENST00000421671 PAPPA-AS1Q5QFB9 102 aa16.21■□□□□ 0.19
LEMD2-202ENST00000421671 HIST2H2BCQ6DN03 193 aa16.21■□□□□ 0.19
LEMD2-202ENST00000421671 HERVK_113P61574 105 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 GAGE2BQ13066 116 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 GAGE2EQ4V326 116 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 ZFAND2AQ8N6M9 145 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 RHPN1-AS1Q9BWJ2 59 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 GAGE2DQ9UEU5 116 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 PRO1854Q9UHT4 67 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 LENEPQ9Y5L5 61 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 IGHV3-30P01768 117 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 IGHV3-30-5P0DP03 117 aa16.2■□□□□ 0.18
LEMD2-202ENST00000421671 LINC00477Q96M19 166 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 ZNF580Q9UK33 172 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 TENM4Q6N022 2769 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 SLC25A20O43772 301 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 CFAP161Q6P656 301 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 C10orf99Q6UWK7 81 aa16.19■□□□□ 0.18
LEMD2-202ENST00000421671 IGKV3-7A0A075B6H7 116 aa16.18■□□□□ 0.18
LEMD2-202ENST00000421671 J3KRW8 73 aa16.18■□□□□ 0.18
LEMD2-202ENST00000421671 OVOL1O14753 267 aa16.18■□□□□ 0.18
LEMD2-202ENST00000421671 NDUFV3P56181 108 aaKnown RBP16.18■□□□□ 0.18
LEMD2-202ENST00000421671 RPL11P62913 178 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms