RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 DPH3P1Q9H4G8 78 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 MUC4Q99102 2169 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 ELANEP08246 267 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 DEFB131AP59861 70 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 PCP2Q8IVA1 136 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 COX8AP10176 69 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 GTSCR1Q86UQ5 136 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 LGALS9BQ3B8N2 356 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 LGALS9CQ6DKI2 356 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
DDX56-203ENST00000421223 K7ERU9 68 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 M0QXV9 152 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
DDX56-203ENST00000421223 C2orf91Q6ZV80 131 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 RASL10AQ92737 203 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
DDX56-203ENST00000421223 A0A0J9YX75 114 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 CKS1BP61024 79 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 C12orf54Q6X4T0 127 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 DEFB125Q8N687 156 aa8.17□□□□□ -1.1
DDX56-203ENST00000421223 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 K7EQG2 157 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 DYNLRB2Q8TF09 96 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 FGF6P10767 208 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 Q8N1Y9 231 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
DDX56-203ENST00000421223 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
DDX56-203ENST00000421223 FN1P02751 2386 aaKnown RBP8.16□□□□□ -1.1
DDX56-203ENST00000421223 IGLV2-18A0A075B6J9 118 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 LINC01546A6NGU7 62 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 KLLNB2CW77 178 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 ZNF56Q15929 161 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
DDX56-203ENST00000421223 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 IGHV4-4A0A075B6R2 117 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 FSHBP01225 129 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 OR1N2Q8NGR9 330 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 DLX4Q92988 240 aaPredicted RBP8.15□□□□□ -1.1
DDX56-203ENST00000421223 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 FAM19A4Q96LR4 140 aa8.15□□□□□ -1.1
DDX56-203ENST00000421223 NAA38Q9BRA0 125 aaKnown RBP8.15□□□□□ -1.1
DDX56-203ENST00000421223 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
DDX56-203ENST00000421223 TRAV8-6A0A0B4J262 113 aa8.15□□□□□ -1.11
DDX56-203ENST00000421223 EMP1P54849 157 aa8.15□□□□□ -1.11
DDX56-203ENST00000421223 ADAMTSL5Q6ZMM2 481 aa8.15□□□□□ -1.11
DDX56-203ENST00000421223 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.11
DDX56-203ENST00000421223 ZNF580Q9UK33 172 aa8.15□□□□□ -1.11
DDX56-203ENST00000421223 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
DDX56-203ENST00000421223 IGKCP01834 107 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 IGHV3OR16-12A0A075B7B8 117 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 LINC01619G3V211 115 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 ATP5LO75964 103 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
DDX56-203ENST00000421223 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 TMEM89A2RUT3 159 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 DPM2O94777 84 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 RAB37Q96AX2 223 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 IGHV1OR15-1A0A075B7D0 117 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 SUMO4Q6EEV6 95 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 C2orf66Q6UXQ4 117 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 Q6ZSV7 163 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 LRRC75A-AS1Q8N1F1 130 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
DDX56-203ENST00000421223 DNAJC9-AS1A6NH13 148 aa8.12□□□□□ -1.11
DDX56-203ENST00000421223 K7EMI3 77 aa8.12□□□□□ -1.11
DDX56-203ENST00000421223 TMEM97Q5BJF2 176 aa8.12□□□□□ -1.11
DDX56-203ENST00000421223 OR9G4Q8NGQ1 327 aa8.12□□□□□ -1.11
DDX56-203ENST00000421223 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 AMMECR1LQ6DCA0 310 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 IGHV3-16A0A0C4DH30 117 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 LGALS9O00182 355 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
DDX56-203ENST00000421223 RPL39P62891 51 aaKnown RBP8.11□□□□□ -1.11
DDX56-203ENST00000421223 GCSHP23434 173 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 ESM1Q9NQ30 184 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 HHLA3Q9XRX5 114 aa8.11□□□□□ -1.11
DDX56-203ENST00000421223 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 CD300EQ496F6 205 aaPredicted RBP8.1□□□□□ -1.11
DDX56-203ENST00000421223 FOXI2Q6ZQN5 318 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 SYT8Q8NBV8 401 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 C20orf78Q9BR46 151 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 ZMAT4Q9H898 229 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 TP53TG1Q9Y2A0 90 aa8.1□□□□□ -1.11
DDX56-203ENST00000421223 RBMY1A1P0DJD3 496 aaKnown RBP8.09□□□□□ -1.11
DDX56-203ENST00000421223 RBMY1CP0DJD4 496 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 CD28P10747 220 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 SEC11AP67812 179 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 RBMY1FQ15415 496 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms