RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 Q6Q795 121 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 TRPT1Q86TN4 253 aaKnown RBP11.19□□□□□ -0.62
CHRD-204ENST00000420973 FXYD5Q96DB9 178 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 K7EIM0 57 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 TRGV9Q99603 122 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 NF1P21359 2839 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 M0R1W7 72 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 HERVK_113P61574 105 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 LMO4P61968 165 aa11.19□□□□□ -0.62
CHRD-204ENST00000420973 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 CFHR4Q92496 578 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 ITPR3Q14573 2671 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 H3BUX3 64 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 Q8TAT8 98 aa11.18□□□□□ -0.62
CHRD-204ENST00000420973 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 LINC00477Q96M19 166 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 WI2-2373I1.2A0A1W2PRP0 233 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 I3L2K1 104 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
CHRD-204ENST00000420973 CT83Q5H943 113 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
CHRD-204ENST00000420973 ZNF815PA8K554 130 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 LY6LH3BQJ8 138 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 C3orf22Q8N5N4 141 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 C8orf31Q8N9H6 132 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 KLK15Q9H2R5 256 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 IGKV2-40A0A087WW87 121 aaPredicted RBP11.16□□□□□ -0.62
CHRD-204ENST00000420973 IGKV2D-40P01614 121 aaPredicted RBP11.16□□□□□ -0.62
CHRD-204ENST00000420973 EDN2P20800 178 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 ITPR2Q14571 2701 aa11.16□□□□□ -0.62
CHRD-204ENST00000420973 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 CRYGBP07316 175 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 PRSS22Q9GZN4 317 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 J3QLI3 93 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 SIGLEC15Q6ZMC9 328 aa11.15□□□□□ -0.62
CHRD-204ENST00000420973 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.63
CHRD-204ENST00000420973 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.63
CHRD-204ENST00000420973 COX6B1P14854 86 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 BLCAPP62952 87 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 MRPL51Q4U2R6 128 aaKnown RBP11.14□□□□□ -0.63
CHRD-204ENST00000420973 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 TRGV3P03979 118 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 UBE2E1P51965 193 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 RNF182Q8N6D2 247 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 Q8N9W7 124 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 THAP8Q8NA92 274 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
CHRD-204ENST00000420973 FBN2P35556 2912 aa11.13□□□□□ -0.63
CHRD-204ENST00000420973 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
CHRD-204ENST00000420973 MRAPQ8TCY5 172 aa11.13□□□□□ -0.63
CHRD-204ENST00000420973 TCRAP04437 139 aa11.13□□□□□ -0.63
CHRD-204ENST00000420973 CEMP1Q6PRD7 247 aaPredicted RBP11.13□□□□□ -0.63
CHRD-204ENST00000420973 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
CHRD-204ENST00000420973 TRAV41A0A0B4J266 112 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 H3BMM0 161 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 SEC61GP60059 68 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 LYZL1Q6UWQ5 148 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 ODF3BA8MYP8 253 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 UQCRQO14949 82 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
CHRD-204ENST00000420973 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
CHRD-204ENST00000420973 DEFB1P60022 68 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 Q6ZS46 218 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 IL17RELQ6ZVW7 336 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 MXRA5Q9NR99 2828 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 F8WDY8 70 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 MLST8Q9BVC4 326 aa11.11□□□□□ -0.63
CHRD-204ENST00000420973 MRPS12O15235 138 aaKnown RBP11.1□□□□□ -0.63
CHRD-204ENST00000420973 GP9P14770 177 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 UBE2D3P61077 147 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 UBE2D2P62837 147 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 RPL13AP40429 203 aaKnown RBP11.1□□□□□ -0.63
CHRD-204ENST00000420973 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
CHRD-204ENST00000420973 TRACP01848 142 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 ORM1P02763 201 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 AVPP01185 164 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 ERCC8Q13216 396 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 C11orf44Q8N8P7 122 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 NACAE9PAV3 2078 aa11.09□□□□□ -0.63
CHRD-204ENST00000420973 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms