RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 HERV-K104P63124 156 aa10.13□□□□□ -0.79
SFTPA1-202ENST00000419470 TMEM86BQ8N661 226 aa10.13□□□□□ -0.79
SFTPA1-202ENST00000419470 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 M0R3E3 92 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 RHODO00212 210 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 LY6G6DO95868 133 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 UBE2D1P51668 147 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 PDE6HQ13956 83 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 PTH2Q96A98 100 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
SFTPA1-202ENST00000419470 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 LOC107984156A0A0G2JMH3 177 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 SRSF2Q01130 221 aaKnown RBP10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 ARL17AQ8IVW1 177 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 RAX2Q96IS3 184 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 S4R3C0 116 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE12JA6NER3 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 A8MWV9 139 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE7O76087 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 MFAP4P55083 255 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 RPL32P62910 135 aaKnown RBP10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE4Q13068 117 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 DUX5Q96PT3 197 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 C21orf62Q9NYP8 219 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 CUBNO60494 3623 aa10.11□□□□□ -0.79
SFTPA1-202ENST00000419470 BRI3O95415 125 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 C15orf32Q32M92 178 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 F8VRH5 84 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 H7C1H1 209 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 CFHR3Q02985 330 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 LAGE3Q14657 143 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 PRR25Q96S07 402 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 ZNF702PQ9H963 129 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
SFTPA1-202ENST00000419470 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 H3BUA1 57 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 ASIPP42127 132 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 NF1P21359 2839 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 IGHV3-23P01764 117 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 PRB4P10163 310 aaPredicted RBP10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
SFTPA1-202ENST00000419470 FAM223BA6NKX1 122 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 TMEM78Q5T7P6 136 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 FAM223AQ8IWN6 122 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 Q8N2B8 174 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 ESM1Q9NQ30 184 aa10.08□□□□□ -0.8
SFTPA1-202ENST00000419470 FABP5P3A8MUU1 101 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 TRGV3P03979 118 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 ANKRD29Q8N6D5 301 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 M0QXV9 152 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 SNCGO76070 127 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 TCL1BO95988 128 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 CTSGP08311 255 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 Q6Q795 121 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 RNF125Q96EQ8 232 aa10.07□□□□□ -0.8
SFTPA1-202ENST00000419470 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 IGHG4P01861 327 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 GATA1P15976 413 aaPredicted RBP10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 ZNF491Q8N8L2 437 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 IGKV2-40A0A087WW87 121 aaPredicted RBP10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 IGKV2D-40P01614 121 aaPredicted RBP10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 CD7P09564 240 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 IFITM1P13164 125 aa10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 ZNF80P51504 273 aaPredicted RBP10.06□□□□□ -0.8
SFTPA1-202ENST00000419470 F8P00451 2351 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 CLEC3BP05452 202 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 PF4V1P10720 104 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 SFTA2Q6UW10 78 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 USMG5Q96IX5 58 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 TNFRSF18Q9Y5U5 241 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 ORM1P02763 201 aa10.05□□□□□ -0.8
SFTPA1-202ENST00000419470 PSMB8P28062 276 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms