RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CFAP126Q5VTH2 177 aa9.66□□□□□ -0.86
LRRTM1-205ENST00000417012 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 NRGNQ92686 78 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 TSPAN13O95857 204 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 PSMB2P49721 201 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 FOXI1Q12951 378 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 KLHL30-AS1Q8NEE0 82 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 TP53TG1Q9Y2A0 90 aa9.65□□□□□ -0.86
LRRTM1-205ENST00000417012 POLQO75417 2590 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 IGHV4-38-2P0DP08 117 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 LY6EQ16553 131 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 SFTA2Q6UW10 78 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 F6UB75 175 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 C19orf54Q5BKX5 351 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 FAM19A4Q96LR4 140 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 ZANQ9Y493 2812 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 IGKV3-7A0A075B6H7 116 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 CRYGDP07320 174 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 EMP1P54849 157 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 PMVKQ15126 192 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 PIMREGQ9BSJ6 248 aa9.64□□□□□ -0.87
LRRTM1-205ENST00000417012 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 IGHV1-69P01742 117 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 ATP5J2P56134 94 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 APRG1Q8IVJ8 170 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 NXPH4O95158 308 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 CD7P09564 240 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 CRIP2P52943 208 aaPredicted RBP9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 POM121L12Q8N7R1 296 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 ZNF418Q8TF45 676 aaPredicted RBP9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
LRRTM1-205ENST00000417012 FAM208BQ5VWN6 2430 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 A0A0J9YY99 117 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 ZFP2Q6ZN57 461 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 IGHV4OR15-8A0A075B7B6 117 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 A0A087WW49 117 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 TSHBP01222 138 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 UBE2D3P61077 147 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 UBE2D2P62837 147 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 C10orf105Q8TEF2 133 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 TMEM141Q96I45 108 aa9.62□□□□□ -0.87
LRRTM1-205ENST00000417012 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 IGIPA6NJ69 53 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 B5MCH6 92 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 FBN2P35556 2912 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 VCYO14598 125 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 TCTEX1D4Q5JR98 221 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 KIF25-AS1Q9Y6Z4 181 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 F5H697 171 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 IGHV3-11P01762 117 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 LINC00315P59091 139 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
LRRTM1-205ENST00000417012 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 RNF183Q96D59 192 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 USMG5Q96IX5 58 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 USP24Q9UPU5 2620 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 PRB1P04280 392 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 Q6ZS46 218 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 NFE4Q86UQ8 179 aa9.6□□□□□ -0.87
LRRTM1-205ENST00000417012 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 H3BUX3 64 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 ZNF462Q96JM2 2506 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 ANKRD17O75179 2603 aaKnown RBP9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 MUC4Q99102 2169 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 A0A087WWL8 130 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 ID1P41134 155 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 JPT2Q9H910 190 aa9.59□□□□□ -0.87
LRRTM1-205ENST00000417012 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 PF4V1P10720 104 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 BLCAPP62952 87 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 TEN1Q86WV5 123 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 LRRK2Q5S007 2527 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 KLLNB2CW77 178 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 H3BUA1 57 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 AVPP01185 164 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 IGHV3-30P01768 117 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 IGHV3-30-5P0DP03 117 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 CDIP1Q9H305 208 aa9.58□□□□□ -0.88
LRRTM1-205ENST00000417012 TCL1BO95988 128 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms