RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 C2orf70A6NJV1 201 aa12.05□□□□□ -0.48
PHRF1-203ENST00000416188 COA6Q5JTJ3 125 aaKnown RBP12.05□□□□□ -0.48
PHRF1-203ENST00000416188 K7EP13 123 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 XCL1P47992 114 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 TDRG1Q3Y452 100 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 BBC3Q96PG8 261 aaPredicted RBP12.04□□□□□ -0.48
PHRF1-203ENST00000416188 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 KIR2DL5BA0A0G2JN68 375 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 KIR2DL5BA0A0G2JPC4 375 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 KIR2DL5AQ8N109 375 aa12.04□□□□□ -0.48
PHRF1-203ENST00000416188 ZFYVE26Q68DK2 2539 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 BUB3O43684 328 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
PHRF1-203ENST00000416188 ARHGAP21Q5T5U3 1957 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 H3BMG7 143 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
PHRF1-203ENST00000416188 TRAV25A0A0B4J276 109 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 TEX48A0A1B0GUV7 120 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 PPDPFLQ8WWR9 84 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
PHRF1-203ENST00000416188 C2CD3Q4AC94 2353 aa12.02□□□□□ -0.49
PHRF1-203ENST00000416188 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
PHRF1-203ENST00000416188 K7EP34 96 aa12.02□□□□□ -0.49
PHRF1-203ENST00000416188 Q6ZQT7 251 aa12.02□□□□□ -0.49
PHRF1-203ENST00000416188 HAMPP81172 84 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 DEFB135Q30KP9 77 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 CRLF1O75462 422 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 TAL2Q16559 108 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 CGB7P0DN87 165 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 FAM167A-AS1Q96KT0 104 aa12.01□□□□□ -0.49
PHRF1-203ENST00000416188 KLK5Q9Y337 293 aaPredicted RBP12.01□□□□□ -0.49
PHRF1-203ENST00000416188 E7EUB6 86 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 RPL32P62910 135 aaKnown RBP12□□□□□ -0.49
PHRF1-203ENST00000416188 NCKAP5O14513 1909 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 F8W1H4 67 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 SMR3AQ99954 134 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 Q9H8V8 135 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 PRAC2D3DTV9 90 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 C5orf38Q86SI9 138 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 CARD19Q96LW7 228 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 DOPEY1Q5JWR5 2465 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 TRAV13-2A0A0B4J235 113 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 CCL18P55774 89 aa12□□□□□ -0.49
PHRF1-203ENST00000416188 MRPL36Q9P0J6 103 aaKnown RBP12□□□□□ -0.49
PHRF1-203ENST00000416188 C12orf74Q32Q52 190 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 C16orf54Q6UWD8 224 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 Q6ZSV7 163 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 TEX22C9J3V5 150 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
PHRF1-203ENST00000416188 ATP5G1P05496 136 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 K7EMI3 77 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 SIVA1O15304 175 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 Q9HAA7 133 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 IGLV2-14P01704 120 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 ODF3L1Q8IXM7 274 aa11.98□□□□□ -0.49
PHRF1-203ENST00000416188 FSTL3O95633 263 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 WDR87Q6ZQQ6 2873 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 BOD1L2Q8IYS8 172 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 DEFB1P60022 68 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 K7EMT4 169 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 CCL25O15444 150 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 CRYGCP07315 174 aa11.97□□□□□ -0.49
PHRF1-203ENST00000416188 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
PHRF1-203ENST00000416188 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.49
PHRF1-203ENST00000416188 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
PHRF1-203ENST00000416188 TMEM61Q8N0U2 210 aa11.96□□□□□ -0.5
PHRF1-203ENST00000416188 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 CFC1P0CG37 223 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 IGHG4P01861 327 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 GYPEP15421 78 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 HILS1P60008 231 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 SPANXA1Q9NS26 97 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 ZNF106Q9H2Y7 1883 aaKnown RBP11.95□□□□□ -0.5
PHRF1-203ENST00000416188 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
PHRF1-203ENST00000416188 WI2-2373I1.2A0A1W2PRP0 233 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 DEFB4AO15263 64 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.95□□□□□ -0.5
PHRF1-203ENST00000416188 SLC25A29Q8N8R3 303 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
PHRF1-203ENST00000416188 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
PHRF1-203ENST00000416188 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 IGLV10-54A0A075B6I4 117 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
PHRF1-203ENST00000416188 Q8N1Y9 231 aa11.94□□□□□ -0.5
PHRF1-203ENST00000416188 F8W735 103 aaPredicted RBP11.94□□□□□ -0.5
PHRF1-203ENST00000416188 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms