RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 POLR2JP52435 117 aaKnown RBP-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 CLLU1Q5K131 121 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 ATP11AUNQ6ZP68 121 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 SMIM15Q7Z3B0 74 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 SNX29P2Q8IUI4 249 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 OR8I2Q8N0Y5 310 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 MAFIPQ8WZ33 124 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 AP1S3Q96PC3 154 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 AIF1LQ9BQI0 150 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 BANF2Q9H503 90 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 V9GYQ6 96 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 NHSL1Q5SYE7 1610 aa-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 NIPBLQ6KC79 2804 aaeCLIP-0.1□□□□□ -2.43
TRAPPC13-203ENST00000415825 SSC5DA1L4H1 1573 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 FRYQ5TBA9 3013 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 ADGBQ8N7X0 1667 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CNOT1A5YKK6 2376 aaKnown RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 BLMP54132 1417 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 KIDINS220Q9ULH0 1771 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CEP290O15078 2479 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CCDC168Q8NDH2 2452 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 LOC105371267A0A1B0GV96 52 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 M0R2P5 195 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 ARPC5O15511 151 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 IGLC6P0CF74 106 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 HIST1H1BP16401 226 aaKnown RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CCL3L1P16619 93 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CMPK1P30085 196 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 SPRR2AP35326 72 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 PSPHP78330 225 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 PLGLB1Q02325 96 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 HIST1H1AQ02539 215 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 KRTAP19-7Q3SYF9 63 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 MORN2Q502X0 79 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 LINC01545Q5VT33 79 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 MIC13Q5XKP0 118 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 TCTE3Q8IZS6 198 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 C20orf197Q8N268 126 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 ATP6V0E2Q8NHE4 81 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 FAM213BQ8TBF2 198 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 TMEM141Q96I45 108 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 SELENOSQ9BQE4 189 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 SLC35B3Q9H1N7 401 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 NDUFA12Q9UI09 145 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 SPG11Q96JI7 2443 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 DSPP15924 2871 aaKnown RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 HECTD4Q9Y4D8 3996 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 ERCC6Q03468 1493 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 CDK12Q9NYV4 1490 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 TACC2O95359 2948 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 BSNQ9UPA5 3926 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 PIK3C2AO00443 1686 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 UBR2Q8IWV8 1755 aa-0.11□□□□□ -2.43
TRAPPC13-203ENST00000415825 FER1L6Q2WGJ9 1857 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 NUP210Q8TEM1 1887 aaPredicted RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TANC1Q9C0D5 1861 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 SOGA1O94964 1423 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 CEP295Q9C0D2 2601 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 CDK13Q14004 1512 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 LAMC1P11047 1609 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 RIF1Q5UIP0 2472 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 ITPR1Q14643 2758 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRGV1A0A0A0MS02 117 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TEX49A0A1B0GTD5 131 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 G3V318 75 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TSTD3H0UI37 97 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 PFDN1O60925 122 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 NMBP08949 121 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 UNQ5815/PRO19632Q6UWF5 114 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 DYNLRB2Q8TF09 96 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 SKA2Q8WVK7 121 aaPredicted RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 C10orf82Q8WW14 230 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 PPDPFLQ8WWR9 84 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 BET1LQ9NYM9 111 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TAS2R8Q9NYW2 309 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 CALML5Q9NZT1 146 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 NOP16Q9Y3C1 178 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 HSPB11Q9Y547 144 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 LAMA1P25391 3075 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 GVINP1Q7Z2Y8 2422 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 COL6A5A8TX70 2615 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 LAMA5O15230 3695 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 CASZ1Q86V15 1759 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 ANK1P16157 1881 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 TRPM7Q96QT4 1865 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 LRP2P98164 4655 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 PKD1L2Q7Z442 2459 aa-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-203ENST00000415825 ZMYM4Q5VZL5 1548 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 MUC2Q02817 5179 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 KIAA1549LQ6ZVL6 1849 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 ATG2AQ2TAZ0 1938 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 CSPG4Q6UVK1 2322 aa-0.13□□□□□ -2.43
TRAPPC13-203ENST00000415825 LRRK2Q5S007 2527 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms