RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CIDEAO60543 219 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 MIFP14174 115 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 IL17DQ8TAD2 202 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 NOP10Q9NPE3 64 aaKnown RBP10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 KIF25-AS1Q9Y6Z4 181 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 X6R8D5 127 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 VWFP04275 2813 aa10.28□□□□□ -0.76
HMGA1P1-201ENST00000415560 A0A087WWL8 130 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 DEFB121Q5J5C9 76 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 FAM74A4Q5TZK3 123 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 JPT2Q9H910 190 aa10.27□□□□□ -0.77
HMGA1P1-201ENST00000415560 C5orf52A6NGY3 159 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 H7C1H1 209 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 RS1O15537 224 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 CRYGDP07320 174 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 ZNF56Q15929 161 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 COA6Q5JTJ3 125 aaKnown RBP10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
HMGA1P1-201ENST00000415560 HOXA5P20719 270 aa10.25□□□□□ -0.77
HMGA1P1-201ENST00000415560 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
HMGA1P1-201ENST00000415560 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
HMGA1P1-201ENST00000415560 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
HMGA1P1-201ENST00000415560 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 TRAV4A0A0B4J268 109 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 LYRM9A8MSI8 78 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 S100A2P29034 98 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 EMP1P54849 157 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 LINC00315P59091 139 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 SAMD10Q9BYL1 202 aa10.24□□□□□ -0.77
HMGA1P1-201ENST00000415560 GAGE12BA1L429 117 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 GAGE7O76087 117 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 NCR2O95944 276 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 Q6ZTI0 123 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 NIT1Q86X76 327 aa10.23□□□□□ -0.77
HMGA1P1-201ENST00000415560 TRAV26-2A0A0B4J265 109 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 PRSS47A8MTI9 375 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 NPYP01303 97 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 LINC00614P0C842 121 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 SUMO4Q6EEV6 95 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 FA2HQ7L5A8 372 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 CHCHD1Q96BP2 118 aaKnown RBP10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
HMGA1P1-201ENST00000415560 IGHV3-73A0A0B4J1V6 119 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 K7EIL1 84 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 SERF1AO75920 110 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 ESDP10768 282 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 ST20Q9HBF5 79 aa10.21□□□□□ -0.77
HMGA1P1-201ENST00000415560 HSBP1O75506 76 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 PRB2P02812 416 aaPredicted RBP10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 PMCHP20382 165 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 UFSP1Q6NVU6 142 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 RNASEKQ6P5S7 137 aaKnown RBP10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 NRACQ8N912 160 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 TMEM18Q96B42 140 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 NIT2Q9NQR4 276 aa10.2□□□□□ -0.78
HMGA1P1-201ENST00000415560 M0QY20 66 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 IGHV3-53P01767 116 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 DEFB130BP0DP73 79 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 DEFB130AP0DP74 79 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 HIST3H2BBQ8N257 126 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 Q8N8P6 123 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 Q8NAQ8 132 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 DNAJC30Q96LL9 226 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 C18orf15Q96N68 181 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 SPATA25Q9BR10 227 aa10.19□□□□□ -0.78
HMGA1P1-201ENST00000415560 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 TRBV6-5A0A0K0K1A5 114 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 DKK2Q9UBU2 259 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 TNFRSF18Q9Y5U5 241 aa10.18□□□□□ -0.78
HMGA1P1-201ENST00000415560 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
HMGA1P1-201ENST00000415560 K7EMI3 77 aa10.17□□□□□ -0.78
HMGA1P1-201ENST00000415560 VCYO14598 125 aa10.17□□□□□ -0.78
HMGA1P1-201ENST00000415560 DAD1P61803 113 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms