RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CACNG8Q8WXS5 425 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BHQ93079 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 ACY3Q96HD9 319 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BNQ99877 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BMQ99879 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 DAZ1Q9NQZ3 744 aaKnown RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 TMEM242Q9NWH2 141 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZNF586Q9NXT0 402 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 FKBP11Q9NYL4 201 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 TBL2Q9Y4P3 447 aaKnown RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HILPDAQ9Y5L2 63 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 URGCP-MRPS24S4R325 110 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 V9GYV3 84 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIVEP2P31629 2446 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 WNK2Q9Y3S1 2297 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRBV6-1A0A0K0K1D8 114 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 A0A1B0GXF2 115 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 A0A1W2PRE2 83 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 C19orf71A6NCJ1 209 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 F2Z2F3 143 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 G3V318 75 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 CORTO00230 105 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 ISLRO14498 428 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 NPFFO15130 113 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 CYB5BO43169 146 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 PDE6DO43924 150 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 HSBP1O75506 76 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 GCGP01275 180 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 IFNA1P01562 189 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGHV1-69P01742 117 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRGC2P03986 189 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRGC1P0CF51 173 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 C8orf88P0DMB2 117 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 PRB4P10163 310 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 CRYBB3P26998 211 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 RPL35P42766 123 aaKnown RBP1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 CEBPGP53567 150 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 ERHP84090 104 aaKnown RBP1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 FXYD3Q14802 87 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 ADIRFQ15847 76 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 GDF5OSQ5U4N7 250 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 LINC00322Q6ZN03 302 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 IQCF2Q8IXL9 164 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST3H2BBQ8N257 126 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TTC9CQ8N5M4 171 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 OR2T10Q8NGZ9 312 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 PFDN5Q99471 154 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 CCL19Q99731 98 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TXNDC17Q9BRA2 123 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 ENY2Q9NPA8 101 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TMEM167BQ9NRX6 74 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 MRPL27Q9P0M9 148 aaKnown RBP1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 TMEM14CQ9P0S9 112 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 KLF12Q9Y4X4 402 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 LY96Q9Y6Y9 160 aa1.69□□□□□ -2.14
HMGB1P11-201ENST00000413899 SPTA1P02549 2419 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 MUC4Q99102 2169 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ANKRD17O75179 2603 aaKnown RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TPRP12270 2363 aaKnown RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRBV19A0A075B6N1 114 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 LOC102724200A0A096LPH7 203 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRAV8-1A0A0A6YYK1 113 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRAV8-2A0A0B4J237 113 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 A0A1W2PPV4 95 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 SMIM27A0A1W2PRY6 76 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 C1orf196B1AJZ1 125 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 H7BYZ3 331 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 M0R3E3 92 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 NDUFS8O00217 210 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 NUPR1O60356 82 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 COX7A2P2O60397 106 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 BRI3O95415 125 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 LTAP01374 205 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TCRAP04437 139 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 MSMBP08118 114 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 CTSGP08311 255 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 SMIM6P0DI80 62 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 HRES1P13985 223 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 CBLN1P23435 193 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 HLA-DMBP28068 263 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 SRP14P37108 136 aaKnown RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ATP5J2P56134 94 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TAS2R45P59539 299 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 YPEL3P61236 119 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 FABP9Q0Z7S8 132 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 TMEM241Q24JQ0 296 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 CLEC12BQ2HXU8 276 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 PYY3Q5JQD4 70 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 C10orf99Q6UWK7 81 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM231DQ6ZW35 169 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 LINC00305Q7Z4B0 112 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 EXOC3-AS1Q8N2X6 119 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 C5orf17Q8NAS9 161 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 GATD1Q8NB37 220 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 SGMS2Q8NHU3 365 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 MYOZ3Q8TDC0 251 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZC2HC1AQ96GY0 325 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms