RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
TMEM248-202ENST00000413593 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
TMEM248-202ENST00000413593 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 A0A087WWL8 130 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 CRYGDP07320 174 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 TIRAPP58753 221 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 TOR2AQ5JU69 321 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 OR2D3Q8NGH3 330 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
TMEM248-202ENST00000413593 BIN3Q9NQY0 253 aa6.89□□□□□ -1.31
TMEM248-202ENST00000413593 MUC21A0A0G2JKD1 596 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 MUC21A0A140T8X8 626 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 P01737 135 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 RPS20P60866 119 aaKnown RBP6.88□□□□□ -1.31
TMEM248-202ENST00000413593 FAM210AQ96ND0 272 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 FAT2Q9NYQ8 4349 aa6.88□□□□□ -1.31
TMEM248-202ENST00000413593 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GAGE12JA6NER3 117 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 K7EN84 100 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 NDUFS6O75380 124 aaKnown RBP6.87□□□□□ -1.31
TMEM248-202ENST00000413593 IGLC6P0CF74 106 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GZMBP10144 247 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GAGE1Q13065 139 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GAGE4Q13068 117 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GAGE5Q13069 117 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 GAGE13Q4V321 117 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 SPANXN1Q5VSR9 72 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 TEX261Q6UWH6 196 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 WFDC10BQ8IUB3 73 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
TMEM248-202ENST00000413593 FER1L6-AS1Q8NA97 138 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 ATP6V0E2Q8NHE4 81 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 EIF5A2Q9GZV4 153 aaKnown RBP6.87□□□□□ -1.31
TMEM248-202ENST00000413593 Q9UF83 564 aa6.87□□□□□ -1.31
TMEM248-202ENST00000413593 BTF3P20290 206 aaKnown RBP6.86□□□□□ -1.31
TMEM248-202ENST00000413593 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
TMEM248-202ENST00000413593 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
TMEM248-202ENST00000413593 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
TMEM248-202ENST00000413593 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
TMEM248-202ENST00000413593 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 XKRY2A2RUG3 117 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 SRP19P09132 144 aaKnown RBP6.85□□□□□ -1.31
TMEM248-202ENST00000413593 DNAH10OSP0CZ25 163 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 CEBPGP53567 150 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 LINC00315P59091 139 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 SSTP61278 116 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 TPPP3Q9BW30 176 aa6.85□□□□□ -1.31
TMEM248-202ENST00000413593 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
TMEM248-202ENST00000413593 TRAV9-2A0A087WT02 112 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 TRAV8-6A0A0B4J262 113 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 IGHV3-38A0A0C4DH36 116 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 K7EP13 123 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 EVI2AP22794 236 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 RAB4BP61018 213 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 ZNF56Q15929 161 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 LELP1Q5T871 98 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 AP1S3Q96PC3 154 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 SMIM7Q9BQ49 75 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 RPP21Q9H633 154 aaKnown RBP6.84□□□□□ -1.31
TMEM248-202ENST00000413593 MSRB1Q9NZV6 116 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
TMEM248-202ENST00000413593 F2Z2F3 143 aa6.83□□□□□ -1.32
TMEM248-202ENST00000413593 CTRLP40313 264 aa6.83□□□□□ -1.32
TMEM248-202ENST00000413593 CACNG7P62955 275 aa6.83□□□□□ -1.32
TMEM248-202ENST00000413593 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
TMEM248-202ENST00000413593 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
TMEM248-202ENST00000413593 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
TMEM248-202ENST00000413593 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 F5H697 171 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 SMIM17P0DL12 118 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 UBE2D3P61077 147 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 UBE2D2P62837 147 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
TMEM248-202ENST00000413593 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 LINC01551Q86U37 167 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 C10orf126Q8N4M7 172 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 OR10G8Q8NGN5 311 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
TMEM248-202ENST00000413593 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 TNFRSF18Q9Y5U5 241 aa6.82□□□□□ -1.32
TMEM248-202ENST00000413593 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 A0A087WWC5 75 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 C9JQL5 133 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 GATCO43716 136 aaKnown RBP6.81□□□□□ -1.32
TMEM248-202ENST00000413593 NTF3P20783 257 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
TMEM248-202ENST00000413593 WDR73Q6P4I2 378 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 NEXN-AS1Q8NBZ9 246 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
TMEM248-202ENST00000413593 GHRHP01286 108 aa6.8□□□□□ -1.32
TMEM248-202ENST00000413593 IGHV3-30P01768 117 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms