RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CRIP1P50238 77 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 UBE2D3P61077 147 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 UBE2D2P62837 147 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 SFRP2Q96HF1 295 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 PSMG3Q9BT73 122 aaPredicted RBP7.83□□□□□ -1.16
LIMS2-210ENST00000413578 NDUFA13Q9P0J0 144 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 ARL2-SNX15V9GYD0 113 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 TRAV34A0A0B4J273 112 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 TRBV10-1A0A0K0K1A3 114 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 B4DEV8 164 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 KRBOX1C9JBD0 128 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 HSD17B11Q8NBQ5 300 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 OR10G8Q8NGN5 311 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 C1orf43Q9BWL3 253 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 TMEM167BQ9NRX6 74 aa7.82□□□□□ -1.16
LIMS2-210ENST00000413578 A0A087WWL8 130 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 PANO1I0J062 215 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 CXorf1O96002 111 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 PRSS1P07477 247 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 ATP6V0CP27449 155 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 FAM74A4Q5TZK3 123 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 Q86TA4 180 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 OR11H4Q8NGC9 324 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 S100ZQ8WXG8 99 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 ZC2HC1AQ96GY0 325 aa7.81□□□□□ -1.16
LIMS2-210ENST00000413578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
LIMS2-210ENST00000413578 TRBV7-3A0A075B6L6 115 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 TRBV6-8A0A0A6YYG3 113 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 SSNA1O43805 119 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 RPL36AP83881 106 aaKnown RBP7.8□□□□□ -1.16
LIMS2-210ENST00000413578 SERF2P84101 59 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 MPV17L2Q567V2 206 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 KRTAP26-1Q6PEX3 210 aa7.8□□□□□ -1.16
LIMS2-210ENST00000413578 RPL36ALQ969Q0 106 aaKnown RBP7.8□□□□□ -1.16
LIMS2-210ENST00000413578 GRIFINA4D1Z8 144 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 SH2D1AO60880 128 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 MBP02144 154 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 CIRBPQ14011 172 aaKnown RBP7.79□□□□□ -1.16
LIMS2-210ENST00000413578 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 KCNIP4Q6PIL6 250 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 SDIM1Q6ZPB5 146 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 Q6ZRU5 148 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 PRR34Q9NV39 138 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 TNFSF18Q9UNG2 199 aa7.79□□□□□ -1.16
LIMS2-210ENST00000413578 M0R036 132 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 PEX7O00628 323 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 ZNF726P1Q15940 193 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 PRR27Q6MZM9 219 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 C15orf54Q8N8G6 183 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 AQP10Q96PS8 301 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 ACTR3CQ9C0K3 210 aaPredicted RBP7.78□□□□□ -1.16
LIMS2-210ENST00000413578 PHLDA3Q9Y5J5 127 aa7.78□□□□□ -1.16
LIMS2-210ENST00000413578 M0R381 172 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 CRPP02741 224 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 TPT1P13693 172 aaKnown RBP7.77□□□□□ -1.17
LIMS2-210ENST00000413578 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
LIMS2-210ENST00000413578 MIAQ16674 131 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 ZFP82Q8N141 532 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 HIST1H2BAQ96A08 127 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
LIMS2-210ENST00000413578 FAM74A7A6NL05 159 aa7.76□□□□□ -1.17
LIMS2-210ENST00000413578 TMEM262E9PQX1 116 aa7.76□□□□□ -1.17
LIMS2-210ENST00000413578 IFNA7P01567 189 aa7.76□□□□□ -1.17
LIMS2-210ENST00000413578 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
LIMS2-210ENST00000413578 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
LIMS2-210ENST00000413578 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
LIMS2-210ENST00000413578 PTTG1O95997 202 aa7.75□□□□□ -1.17
LIMS2-210ENST00000413578 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
LIMS2-210ENST00000413578 RAB4BP61018 213 aa7.75□□□□□ -1.17
LIMS2-210ENST00000413578 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
LIMS2-210ENST00000413578 VAX2Q9UIW0 290 aa7.75□□□□□ -1.17
LIMS2-210ENST00000413578 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 CTXND1A0A1B0GTU2 59 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 LTAP01374 205 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 UBE2G2P60604 165 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 PKIAP61925 76 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 CNBPP62633 177 aaKnown RBP7.74□□□□□ -1.17
LIMS2-210ENST00000413578 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
LIMS2-210ENST00000413578 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
LIMS2-210ENST00000413578 A0A0D9SG52 128 aa7.73□□□□□ -1.17
LIMS2-210ENST00000413578 RBX1P62877 108 aa7.73□□□□□ -1.17
LIMS2-210ENST00000413578 OR10AG1Q8NH19 301 aa7.73□□□□□ -1.17
LIMS2-210ENST00000413578 CHCHD5Q9BSY4 110 aa7.73□□□□□ -1.17
LIMS2-210ENST00000413578 Q5BKY6 102 aa7.72□□□□□ -1.17
LIMS2-210ENST00000413578 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
LIMS2-210ENST00000413578 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
LIMS2-210ENST00000413578 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
LIMS2-210ENST00000413578 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
LIMS2-210ENST00000413578 SNAI2O43623 268 aa7.71□□□□□ -1.18
LIMS2-210ENST00000413578 SLPIP03973 132 aa7.71□□□□□ -1.18
LIMS2-210ENST00000413578 CXCL1P09341 107 aa7.71□□□□□ -1.18
LIMS2-210ENST00000413578 ZNF56Q15929 161 aa7.71□□□□□ -1.18
LIMS2-210ENST00000413578 TMEM97Q5BJF2 176 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms