RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 F8W036 122 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 RTL8CO15255 209 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 S100PP25815 95 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 EMP1P54849 157 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 JOSD1Q15040 202 aaPredicted RBP3.54□□□□□ -1.84
NOD1-203ENST00000413433 MSMO1Q15800 293 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 TMEM144Q7Z5S9 345 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 FRZBQ92765 325 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 RBPMSQ93062 196 aaKnown RBP3.54□□□□□ -1.84
NOD1-203ENST00000413433 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 MRPL36Q9P0J6 103 aaKnown RBP3.54□□□□□ -1.84
NOD1-203ENST00000413433 PRNDQ9UKY0 176 aa3.54□□□□□ -1.84
NOD1-203ENST00000413433 A0A087WXM4 84 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DEFB131BA0A096LNP1 70 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 TRAV10A0A0B4J240 114 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 C7orf66A4D0T2 115 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 ZNF98A6NK75 572 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 GPR31O00270 319 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 S100A8P05109 93 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 NPPCP23582 126 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 ETV6P41212 452 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 FXYD7P58549 80 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DEFA1P59665 94 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DEFA3P59666 94 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DEFB1P60022 68 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 SPCS3P61009 180 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 LSM3P62310 102 aaKnown RBP3.53□□□□□ -1.84
NOD1-203ENST00000413433 RANP62826 216 aaKnown RBP3.53□□□□□ -1.84
NOD1-203ENST00000413433 C12orf74Q32Q52 190 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DAZ4Q86SG3 579 aaKnown RBP3.53□□□□□ -1.84
NOD1-203ENST00000413433 AMN1Q8IY45 258 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 FER1L6-AS1Q8NA97 138 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 PDCD10Q9BUL8 212 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 GNB1LQ9BYB4 327 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 FXYD6Q9H0Q3 95 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 KCNIP2Q9NS61 270 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 FKBP11Q9NYL4 201 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 RYR1P21817 5038 aa3.53□□□□□ -1.84
NOD1-203ENST00000413433 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 LTAP01374 205 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 IFNA17P01571 189 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 MIFP14174 115 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 HTN3P15516 51 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 SNCAP37840 140 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 TMBIM6P55061 237 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 TCTAP57738 103 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 TAS2R20P59543 309 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 HSPE1P61604 102 aaKnown RBP3.52□□□□□ -1.85
NOD1-203ENST00000413433 ERHP84090 104 aaKnown RBP3.52□□□□□ -1.85
NOD1-203ENST00000413433 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 DHRS2Q13268 280 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 SMCO1Q147U7 214 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 NEDD8Q15843 81 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 PSMG4Q5JS54 123 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 Q8WTZ3 238 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 S100A16Q96FQ6 103 aaKnown RBP3.52□□□□□ -1.85
NOD1-203ENST00000413433 GINS3Q9BRX5 216 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 SHANK2-AS3Q9BTD1 123 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
NOD1-203ENST00000413433 IFNA10P01566 189 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 IGKV1-5P01602 117 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 CD5P06127 495 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 P0DMU3 169 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 FAM231AP0DMU4 169 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 FAM231CP0DMU5 169 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 CRYBB3P26998 211 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 RAB5BP61020 215 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 HERVK_113P63121 156 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 TMEM69Q5SWH9 247 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 GDF5OSQ5U4N7 250 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 NEGR1Q7Z3B1 354 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 SNX29P2Q8IUI4 249 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 UBE2DNLQ8IWF7 75 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 DCANP1Q8TF63 244 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 DIRAS2Q96HU8 199 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 TP53RKQ96S44 253 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 MED28Q9H204 178 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 COMMD3Q9UBI1 195 aa3.51□□□□□ -1.85
NOD1-203ENST00000413433 IFNA21P01568 189 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 IGKV1-17P01599 117 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 PRM2P04554 102 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 SMIM6P0DI80 62 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 RNASE2P10153 161 aaKnown RBP3.5□□□□□ -1.85
NOD1-203ENST00000413433 S100GP29377 79 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 AKR1C2P52895 323 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 LINC00483Q53H64 154 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 Q8N9L7 120 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 RAB2BQ8WUD1 216 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 BIN3Q9NQY0 253 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 ANAPC10Q9UM13 185 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 DNAH17Q9UFH2 4485 aa3.5□□□□□ -1.85
NOD1-203ENST00000413433 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
NOD1-203ENST00000413433 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
NOD1-203ENST00000413433 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
NOD1-203ENST00000413433 PKD1P98161 4303 aa3.49□□□□□ -1.85
NOD1-203ENST00000413433 TRAV2A0A0B4J234 112 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms