RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SMKR1H3BMG3 65 aa12.6□□□□□ -0.39
PTPRC-206ENST00000413409 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
PTPRC-206ENST00000413409 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
PTPRC-206ENST00000413409 DYNLRB2Q8TF09 96 aa12.6□□□□□ -0.39
PTPRC-206ENST00000413409 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
PTPRC-206ENST00000413409 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 PRSS47A8MTI9 375 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 CDKN1BP46527 198 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 PET117Q6UWS5 81 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 AMTNQ6UX39 209 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 RAX2Q96IS3 184 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 KRTAP3-3Q9BYR6 98 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 KRTAP3-2Q9BYR7 98 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
PTPRC-206ENST00000413409 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 ALMS1Q8TCU4 4167 aa12.59□□□□□ -0.39
PTPRC-206ENST00000413409 SYS1-DBNDD2H3BUS1 97 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
PTPRC-206ENST00000413409 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 EVI2AP22794 236 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 CTAG1AP78358 180 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 AP1S3Q96PC3 154 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 MAP1LC3CQ9BXW4 147 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
PTPRC-206ENST00000413409 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
PTPRC-206ENST00000413409 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
PTPRC-206ENST00000413409 HBDP02042 147 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
PTPRC-206ENST00000413409 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 SPAG8Q99932 426 aaPredicted RBP12.57□□□□□ -0.4
PTPRC-206ENST00000413409 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
PTPRC-206ENST00000413409 A0A096LNJ9 63 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 M0R381 172 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 LINC00173Q6ZV60 143 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 SPATA12Q7Z6I5 190 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 NRACQ8N912 160 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 PAM16Q9Y3D7 125 aa12.56□□□□□ -0.4
PTPRC-206ENST00000413409 CCL24O00175 119 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 GNRH2O43555 120 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 Q8N8P6 123 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
PTPRC-206ENST00000413409 KIAA1109Q2LD37 5005 aa12.55□□□□□ -0.4
PTPRC-206ENST00000413409 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
PTPRC-206ENST00000413409 DEFB131AP59861 70 aa12.54□□□□□ -0.4
PTPRC-206ENST00000413409 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
PTPRC-206ENST00000413409 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
PTPRC-206ENST00000413409 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 H3BMM0 161 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 SPINK13Q1W4C9 94 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 SPATA45Q537H7 98 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 LINC01545Q5VT33 79 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 MRPL52Q86TS9 123 aaKnown RBP12.53□□□□□ -0.4
PTPRC-206ENST00000413409 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 MIEN1Q9BRT3 115 aa12.53□□□□□ -0.4
PTPRC-206ENST00000413409 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 GAS8-AS1O95177 125 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 PPP1R17O96001 155 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 CD7P09564 240 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.41
PTPRC-206ENST00000413409 EDA2RQ9HAV5 297 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 HECTD4Q9Y4D8 3996 aa12.52□□□□□ -0.41
PTPRC-206ENST00000413409 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
PTPRC-206ENST00000413409 IGKV3-20P01619 116 aa12.51□□□□□ -0.41
PTPRC-206ENST00000413409 CD300EQ496F6 205 aaPredicted RBP12.51□□□□□ -0.41
PTPRC-206ENST00000413409 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
PTPRC-206ENST00000413409 FCER1GP30273 86 aa12.5□□□□□ -0.41
PTPRC-206ENST00000413409 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
PTPRC-206ENST00000413409 C20orf78Q9BR46 151 aa12.5□□□□□ -0.41
PTPRC-206ENST00000413409 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
PTPRC-206ENST00000413409 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
PTPRC-206ENST00000413409 ZNF705AQ6ZN79 300 aaPredicted RBP12.49□□□□□ -0.41
PTPRC-206ENST00000413409 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
PTPRC-206ENST00000413409 TRAV26-2A0A0B4J265 109 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 K7EMI3 77 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
PTPRC-206ENST00000413409 LGALS9BQ3B8N2 356 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
PTPRC-206ENST00000413409 LGALS9CQ6DKI2 356 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 Q8N1Y9 231 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 C14orf178Q8N769 122 aaPredicted RBP12.48□□□□□ -0.41
PTPRC-206ENST00000413409 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 DNAH10Q8IVF4 4471 aa12.48□□□□□ -0.41
PTPRC-206ENST00000413409 MGPP08493 103 aa12.47□□□□□ -0.41
PTPRC-206ENST00000413409 IGLC3P0DOY3 106 aa12.47□□□□□ -0.41
PTPRC-206ENST00000413409 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms