RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 CT83Q5H943 113 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 TTC32Q5I0X7 151 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 IL36BQ9NZH7 164 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 HHLA3Q9XRX5 114 aa6.91□□□□□ -1.3
PKP4-203ENST00000411900 TRBV24-1A0A075B6N3 115 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 SMIM27A0A1W2PRY6 76 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 GATCO43716 136 aaKnown RBP6.9□□□□□ -1.3
PKP4-203ENST00000411900 NXPH4O95158 308 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 TYMSP04818 313 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 CXCL1P09341 107 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 SMUG1Q53HV7 270 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 DMRTA1Q5VZB9 504 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 KRTAP3-3Q9BYR6 98 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
PKP4-203ENST00000411900 LRP1BQ9NZR2 4599 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 TRAV9-1A0A075B6T8 112 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 TRAV21A0A0B4J279 112 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 IGHV3-16A0A0C4DH30 117 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 SIVA1O15304 175 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 FOXA3P55318 350 aaPredicted RBP6.89□□□□□ -1.31
PKP4-203ENST00000411900 LINC00315P59091 139 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 PRR27Q6MZM9 219 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 NDFIP1Q9BT67 221 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
PKP4-203ENST00000411900 HSPG2P98160 4391 aa6.89□□□□□ -1.31
PKP4-203ENST00000411900 LOC100131303A0A0U1RQF7 123 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 FAM231BA6NCW3 169 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 FABP5P3A8MUU1 101 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 K7EQD1 137 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 SH2D1AO60880 128 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 P01737 135 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 GYPEP15421 78 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 SLAQ13239 276 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
PKP4-203ENST00000411900 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 FAM162BQ5T6X4 162 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 TSKUQ8WUA8 353 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 RASL10AQ92737 203 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 SPXQ9BT56 116 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 GFRA4Q9GZZ7 299 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 C11orf21Q9P2W6 132 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 TNFRSF18Q9Y5U5 241 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
PKP4-203ENST00000411900 TGIF2-C20orf24A0A0A6YYL0 155 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 A0A1W2PPQ1 181 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 M0R2P5 195 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 SRIP30626 198 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
PKP4-203ENST00000411900 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 TDRG1Q3Y452 100 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 NEGR1Q7Z3B1 354 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 OR4C5Q8NGB2 326 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
PKP4-203ENST00000411900 URGCP-MRPS24S4R325 110 aa6.87□□□□□ -1.31
PKP4-203ENST00000411900 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 IGHV3-73A0A0B4J1V6 119 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 IGKV3D-20A0A0C4DH25 116 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 A8MWL6 223 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 RAB5AP20339 215 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 S100PP25815 95 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
PKP4-203ENST00000411900 KCNIP4Q6PIL6 250 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 WFDC10BQ8IUB3 73 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 NUP35Q8NFH5 326 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
PKP4-203ENST00000411900 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
PKP4-203ENST00000411900 PHOX2AO14813 284 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 DNLZQ5SXM8 178 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
PKP4-203ENST00000411900 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 BTF3L4Q96K17 158 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 KCNS1Q96KK3 526 aa6.85□□□□□ -1.31
PKP4-203ENST00000411900 A0A1B0GXF2 115 aa6.84□□□□□ -1.31
PKP4-203ENST00000411900 ORM1P02763 201 aa6.84□□□□□ -1.31
PKP4-203ENST00000411900 GZMBP10144 247 aa6.84□□□□□ -1.31
PKP4-203ENST00000411900 RPS20P60866 119 aaKnown RBP6.84□□□□□ -1.31
PKP4-203ENST00000411900 ZNF876PQ49A33 203 aa6.84□□□□□ -1.31
PKP4-203ENST00000411900 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.84□□□□□ -1.31
PKP4-203ENST00000411900 NAT8BQ9UHF3 227 aa6.84□□□□□ -1.31
PKP4-203ENST00000411900 HIGD1CA8MV81 97 aa6.83□□□□□ -1.32
PKP4-203ENST00000411900 GATA1P15976 413 aaPredicted RBP6.83□□□□□ -1.32
PKP4-203ENST00000411900 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
PKP4-203ENST00000411900 MAPKAPK5-AS1Q8N8E1 139 aa6.83□□□□□ -1.32
PKP4-203ENST00000411900 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
PKP4-203ENST00000411900 SSBP4Q9BWG4 385 aaPredicted RBP6.83□□□□□ -1.32
PKP4-203ENST00000411900 RS1O15537 224 aa6.82□□□□□ -1.32
PKP4-203ENST00000411900 SNAI2O43623 268 aa6.82□□□□□ -1.32
PKP4-203ENST00000411900 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
PKP4-203ENST00000411900 DNAH10OSP0CZ25 163 aa6.82□□□□□ -1.32
PKP4-203ENST00000411900 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
PKP4-203ENST00000411900 CTRLP40313 264 aa6.82□□□□□ -1.32
PKP4-203ENST00000411900 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms