RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NIT1Q86X76 327 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 SUN5Q8TC36 379 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 RAB24Q969Q5 203 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 JPT2Q9H910 190 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 DNAH8Q96JB1 4490 aa10.93□□□□□ -0.66
MRPL55-220ENST00000411464 FABP5P3A8MUU1 101 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 RHODO00212 210 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 BCL2L11O43521 198 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 NKX2-5P52952 324 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-220ENST00000411464 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 CYTL1Q9NRR1 136 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
MRPL55-220ENST00000411464 BORCS7-ASMTA0A0B4J1R7 106 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 KANTRA0A1W2PQU2 76 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 CXorf1O96002 111 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 OR2G3Q8NGZ4 309 aa10.91□□□□□ -0.66
MRPL55-220ENST00000411464 MBP02144 154 aa10.9□□□□□ -0.66
MRPL55-220ENST00000411464 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
MRPL55-220ENST00000411464 FAM74A4Q5TZK3 123 aa10.9□□□□□ -0.66
MRPL55-220ENST00000411464 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
MRPL55-220ENST00000411464 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
MRPL55-220ENST00000411464 HMCN2Q8NDA2 5059 aa10.9□□□□□ -0.67
MRPL55-220ENST00000411464 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
MRPL55-220ENST00000411464 B4DEV8 164 aa10.89□□□□□ -0.67
MRPL55-220ENST00000411464 H3BVH4 76 aa10.89□□□□□ -0.67
MRPL55-220ENST00000411464 Q0VG73 95 aa10.89□□□□□ -0.67
MRPL55-220ENST00000411464 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
MRPL55-220ENST00000411464 ARL2-SNX15V9GYD0 113 aa10.89□□□□□ -0.67
MRPL55-220ENST00000411464 IFNA7P01567 189 aa10.88□□□□□ -0.67
MRPL55-220ENST00000411464 ARMS2P0C7Q2 107 aa10.88□□□□□ -0.67
MRPL55-220ENST00000411464 ATP6V0CP27449 155 aa10.88□□□□□ -0.67
MRPL55-220ENST00000411464 SERF2P84101 59 aa10.88□□□□□ -0.67
MRPL55-220ENST00000411464 ATRAIDQ6UW56 229 aa10.88□□□□□ -0.67
MRPL55-220ENST00000411464 PSMG3Q9BT73 122 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-220ENST00000411464 ACTR3CQ9C0K3 210 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-220ENST00000411464 A0A087WWL8 130 aa10.87□□□□□ -0.67
MRPL55-220ENST00000411464 A0A1W2PRE2 83 aa10.87□□□□□ -0.67
MRPL55-220ENST00000411464 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
MRPL55-220ENST00000411464 RPL37AP61513 92 aaKnown RBP10.87□□□□□ -0.67
MRPL55-220ENST00000411464 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
MRPL55-220ENST00000411464 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
MRPL55-220ENST00000411464 M0R036 132 aa10.86□□□□□ -0.67
MRPL55-220ENST00000411464 RPL36AP83881 106 aaKnown RBP10.86□□□□□ -0.67
MRPL55-220ENST00000411464 RPL36ALQ969Q0 106 aaKnown RBP10.86□□□□□ -0.67
MRPL55-220ENST00000411464 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
MRPL55-220ENST00000411464 PHLDA3Q9Y5J5 127 aa10.86□□□□□ -0.67
MRPL55-220ENST00000411464 TRBV10-1A0A0K0K1A3 114 aa10.85□□□□□ -0.67
MRPL55-220ENST00000411464 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
MRPL55-220ENST00000411464 KRBOX1C9JBD0 128 aa10.85□□□□□ -0.67
MRPL55-220ENST00000411464 DNLZQ5SXM8 178 aa10.85□□□□□ -0.67
MRPL55-220ENST00000411464 UBR4Q5T4S7 5183 aa10.85□□□□□ -0.67
MRPL55-220ENST00000411464 CRPP02741 224 aa10.84□□□□□ -0.67
MRPL55-220ENST00000411464 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
MRPL55-220ENST00000411464 EIF5AP63241 154 aaKnown RBP10.84□□□□□ -0.67
MRPL55-220ENST00000411464 STOML3Q8TAV4 291 aa10.84□□□□□ -0.67
MRPL55-220ENST00000411464 TRBV7-3A0A075B6L6 115 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 M0R381 172 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 PEX7O00628 323 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 CRIP1P50238 77 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 UBE2D3P61077 147 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 UBE2D2P62837 147 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 ENHOQ6UWT2 76 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 Q86TA4 180 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 C15orf54Q8N8G6 183 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 ZC2HC1AQ96GY0 325 aa10.83□□□□□ -0.68
MRPL55-220ENST00000411464 SH2D1AO60880 128 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 UBE2G2P60604 165 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 FAM162BQ5T6X4 162 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-220ENST00000411464 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
MRPL55-220ENST00000411464 TRBV6-8A0A0A6YYG3 113 aa10.81□□□□□ -0.68
MRPL55-220ENST00000411464 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
MRPL55-220ENST00000411464 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
MRPL55-220ENST00000411464 TMSB15BA0A087X1C1 80 aa10.8□□□□□ -0.68
MRPL55-220ENST00000411464 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
MRPL55-220ENST00000411464 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
MRPL55-220ENST00000411464 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
MRPL55-220ENST00000411464 COX8CQ7Z4L0 72 aa10.8□□□□□ -0.68
MRPL55-220ENST00000411464 DAZAP1Q96EP5 407 aaKnown RBP10.8□□□□□ -0.68
MRPL55-220ENST00000411464 PKIAP61925 76 aa10.79□□□□□ -0.68
MRPL55-220ENST00000411464 UBE2G1P62253 170 aa10.79□□□□□ -0.68
MRPL55-220ENST00000411464 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-220ENST00000411464 OR10G8Q8NGN5 311 aa10.79□□□□□ -0.68
MRPL55-220ENST00000411464 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 FAM74A7A6NL05 159 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 PRSS1P07477 247 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
MRPL55-220ENST00000411464 ZNF726P1Q15940 193 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 MIAQ16674 131 aa10.78□□□□□ -0.68
MRPL55-220ENST00000411464 LINC01559Q495D7 138 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms