RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 LSM7Q9UK45 103 aaKnown RBP-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 B9D1Q9UPM9 204 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 ASB4Q9Y574 426 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 ZFYVE9O95405 1425 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 UACAQ9BZF9 1416 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 SNAPC4Q5SXM2 1469 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 CAMSAP1Q5T5Y3 1602 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 MYH2Q9UKX2 1941 aa-2.8□□□□□ -2.86
RNU4-88P-201ENST00000411220 NALCNQ8IZF0 1738 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 KIF14Q15058 1648 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 NEXMIFQ5QGS0 1516 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 NINLQ9Y2I6 1382 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 SMCO2A6NFE2 343 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAMP3O60896 148 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 EIF3JO75822 258 aaKnown RBP-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 UBCP0CG48 685 aaKnown RBP-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 TNFSF4P23510 183 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 TCTAP57738 103 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 UBA52P62987 128 aaKnown RBP-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 C5orf64Q2M2E5 130 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 DCUN1D2Q6PH85 259 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 GBP6Q6ZN66 633 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 NT5CQ8TCD5 201 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 MGARPQ8TDB4 240 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 PPDPFLQ8WWR9 84 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 C7orf34Q96L11 122 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 TMEM133Q9H2Q1 129 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 POLE3Q9NRF9 147 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 FANCLQ9NW38 375 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 DNAJB9Q9UBS3 223 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 TRAPPC2LQ9UL33 140 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 BLOC1S6Q9UL45 172 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 LIPT1Q9Y234 373 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 GSTK1Q9Y2Q3 226 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 V9GYH0 126 aa-2.81□□□□□ -2.86
RNU4-88P-201ENST00000411220 CCDC171Q6TFL3 1326 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 TRAV8-7A0A075B6U6 113 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 A0A0B4J2E0 115 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 NDUFB3O43676 98 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 HMGB1P09429 215 aaKnown RBP-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 ATP5OP48047 213 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 TTPAP49638 278 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 MYL5Q02045 173 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 C6orf226Q5I0X4 101 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 METTL23Q86XA0 190 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 NATD1Q8N6N6 113 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 OCC1Q8TAD7 63 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 IFT81Q8WYA0 676 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAB8BQ92930 207 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 TMCO6Q96DC7 493 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 LRTM1Q9HBL6 345 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 PTRH2Q9Y3E5 179 aaKnown RBP-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 SNX10Q9Y5X0 201 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 SERP1Q9Y6X1 66 aa-2.82□□□□□ -2.86
RNU4-88P-201ENST00000411220 OOEPA6NGQ2 149 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 C8orf87E5RJ46 101 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 M0R1B8 84 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 ATP6V1G1O75348 118 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 HIST1H1DP16402 221 aaKnown RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 S100A4P26447 101 aaKnown RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 IFNA8P32881 189 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPS27P42677 84 aaKnown RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 SULT1E1P49888 294 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 SEC61GP60059 68 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 FABP5Q01469 135 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 JOSD1Q15040 202 aaPredicted RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 C2orf76Q3KRA6 126 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 GGTA1PQ4G0N0 100 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 CENPWQ5EE01 88 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 SAPCD1Q5SSQ6 148 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 C11orf88Q6PI97 169 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPS27LQ71UM5 84 aaKnown RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 ATP5L2Q7Z4Y8 100 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 CCDC77Q9BR77 488 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 UXTQ9UBK9 157 aaPredicted RBP-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 QSER1Q2KHR3 1735 aa-2.83□□□□□ -2.86
RNU4-88P-201ENST00000411220 NPATQ14207 1427 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 UHRF1BP1Q6BDS2 1440 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 TJP1Q07157 1748 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 SCN7AQ01118 1682 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 hCG_1818297A0A087WSY0 165 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 TCRBV21S2A2A0A5A6 115 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 C7orf77A4D0Y5 90 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 CYTH3O43739 400 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 EDF1O60869 148 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 IFNA6P05013 189 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 RPL7P18124 248 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 SAT1P21673 171 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 STOMP27105 288 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 ATP5DP30049 168 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 OMPP47874 163 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 RAB28P51157 221 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 MFAP1P55081 439 aaKnown RBP-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 CARD18P57730 90 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 SSTP61278 116 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 HBG1P69891 147 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 HBG2P69892 147 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 EXOC3L4Q17RC7 722 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 RIPPLY2Q5TAB7 128 aa-2.84□□□□□ -2.86
RNU4-88P-201ENST00000411220 CST9Q5W186 159 aa-2.84□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms