RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 IFI27L1Q96BM0 104 aa-1.72□□□□□ -2.68
RNU2-55P-201ENST00000411146 PYCARDQ9ULZ3 195 aa-1.72□□□□□ -2.68
RNU2-55P-201ENST00000411146 SSR3Q9UNL2 185 aa-1.72□□□□□ -2.68
RNU2-55P-201ENST00000411146 DNAH9Q9NYC9 4486 aa-1.72□□□□□ -2.68
RNU2-55P-201ENST00000411146 LRP6O75581 1613 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 ARHGAP31Q2M1Z3 1444 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 IGHV1-24A0A0C4DH33 117 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 TRDV1A0A1B0GX56 115 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 H3BQV1 296 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 DEGS1O15121 323 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 CRYBA4P53673 196 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 MORN4Q8NDC4 146 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 V9GYV3 84 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 ADCY9O60503 1353 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 DOCK1Q14185 1865 aa-1.73□□□□□ -2.69
RNU2-55P-201ENST00000411146 SONP18583 2426 aaKnown RBP-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 TRAV1-2A0A0B4J238 106 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 I3L2K1 104 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 SPRR1BP22528 89 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 PPP1R2P41236 205 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 ERVS71-1P61550 626 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 ARF6P62330 175 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 BASP1P80723 227 aaKnown RBP-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 SSBP1Q04837 148 aaKnown RBP-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 DGCR14Q96DF8 476 aaKnown RBP-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 PBDC1Q9BVG4 233 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 LYRM2Q9NU23 88 aaPredicted RBP-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 NDUFAF1Q9Y375 327 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 SPCS1Q9Y6A9 102 aa-1.74□□□□□ -2.69
RNU2-55P-201ENST00000411146 TNRC18O15417 2968 aaPredicted RBP-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 KDM5CP41229 1560 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 PAPPAQ13219 1627 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 TRBV27A0A0K0K1C4 114 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 SMIM23A6NLE4 172 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 PPP5D1E7EU14 171 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 CKS2P33552 79 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 CCL7P80098 99 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 STX19Q8N4C7 294 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 NUP35Q8NFH5 326 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 SH3BGRL3Q9H299 93 aa-1.75□□□□□ -2.69
RNU2-55P-201ENST00000411146 IFNA21P01568 189 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 SLC25A6P12236 298 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 CRYGSP22914 178 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 SDC2P34741 201 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 AKR1D1P51857 326 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 AKR1C8PQ5T2L2 129 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 LINC00305Q7Z4B0 112 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 TP53AIP1Q9HCN2 124 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 PLB1Q6P1J6 1458 aa-1.76□□□□□ -2.69
RNU2-55P-201ENST00000411146 KDM5AP29375 1690 aaKnown RBP-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 LAMA2P24043 3122 aaKnown RBP-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 M0QZK8 103 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 ATG12O94817 140 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 CEBPGP53567 150 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 OR8B8Q15620 311 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 PPDPFLQ8WWR9 84 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 AP3S1Q92572 193 aa-1.77□□□□□ -2.69
RNU2-55P-201ENST00000411146 PRRC2CQ9Y520 2896 aaKnown RBP-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 TRAV13-1A0A0B4J241 112 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 MAP1LC3B2A6NCE7 125 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 HBDP02042 147 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 SPA17Q15506 151 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 C3orf33Q6P1S2 294 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 CROCCP2Q86T23 111 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 GINS3Q9BRX5 216 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 FXYD6Q9H0Q3 95 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 SCN3BQ9NY72 215 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 LAMTOR3Q9UHA4 124 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 DNAH2Q9P225 4427 aa-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 GOLGA4Q13439 2230 aaKnown RBP-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 TEP1Q99973 2627 aaKnown RBP-1.78□□□□□ -2.69
RNU2-55P-201ENST00000411146 CUBNO60494 3623 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 XIRP1Q702N8 1843 aaKnown RBP-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 ERCC6L2Q5T890 1561 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 M0R2P5 195 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 S100A11P31949 105 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 PCBD1P61457 104 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 HRCT1Q6UXD1 115 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 SLC25A26Q70HW3 274 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 PPP1R14BQ96C90 147 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 PHB2Q99623 299 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 MED11Q9P086 117 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 NUBP2Q9Y5Y2 271 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 LAMA1P25391 3075 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 MYH8P13535 1937 aa-1.79□□□□□ -2.7
RNU2-55P-201ENST00000411146 ZNF236Q9UL36 1845 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 ZNF609O15014 1411 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 CCDC171Q6TFL3 1326 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 H3BMG7 143 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 PIN1P1O15428 100 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 CDKN2CP42773 168 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 EDDM3BP56851 147 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 DCDP81605 110 aaKnown RBP-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 WFDC6Q9BQY6 131 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 CBLN4Q9NTU7 201 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 VPS13BQ7Z7G8 4022 aa-1.8□□□□□ -2.7
RNU2-55P-201ENST00000411146 TRAV12-3A0A0B4J271 114 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 TRBV6-1A0A0K0K1D8 114 aa-1.81□□□□□ -2.7
RNU2-55P-201ENST00000411146 TMED2Q15363 201 aa-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms