RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 FA2HQ7L5A8 372 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF575Q86XF7 245 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 ORMDL3Q8N138 153 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 TMEM191AQ9H0A3 160 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 AP5S1Q9NUS5 200 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 PKD1P98161 4303 aa9.21□□□□□ -0.93
CHRNA1-205ENST00000409542 MUC4Q99102 2169 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 D6R8Y8 96 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 ORM1P02763 201 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 SPATA12Q7Z6I5 190 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 OR11H2Q8NH07 326 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 PRELID3AQ96N28 172 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 KRTAP4-5Q9BYR2 181 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 CSTL1Q9H114 145 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 LENEPQ9Y5L5 61 aa9.21□□□□□ -0.94
CHRNA1-205ENST00000409542 IGHV3OR16-13A0A075B7E8 117 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 IGHV3-74A0A0B4J1X5 117 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 LINC00173Q6ZV60 143 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 ATOH7Q8N100 152 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 OR10AG1Q8NH19 301 aa9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
CHRNA1-205ENST00000409542 IGHV3-49A0A0A0MS15 119 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 OR4C46A6NHA9 309 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 IGLL5B9A064 214 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 PPBPP02775 128 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 TWIST1Q15672 202 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 LAMTOR2Q9Y2Q5 125 aa9.19□□□□□ -0.94
CHRNA1-205ENST00000409542 SOCS3O14543 225 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 TFPI2P48307 235 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 HNRNPA3P51991 378 aaKnown RBP9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 Q6ZN92 141 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
CHRNA1-205ENST00000409542 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
CHRNA1-205ENST00000409542 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
CHRNA1-205ENST00000409542 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
CHRNA1-205ENST00000409542 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
CHRNA1-205ENST00000409542 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
CHRNA1-205ENST00000409542 IGKV3-7A0A075B6H7 116 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 K7EMT4 169 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 CKS2P33552 79 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 ZNF738Q8NE65 137 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 C11orf21Q9P2W6 132 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
CHRNA1-205ENST00000409542 IGHV4-4A0A075B6R2 117 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 A0A096LNJ9 63 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 TCAPO15273 167 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 SNAI2O43623 268 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 TSPOP30536 169 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 TCTAP57738 103 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 CACNG7P62955 275 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
CHRNA1-205ENST00000409542 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 RTL8CO15255 209 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 NPYP01303 97 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 RBMY1A1P0DJD3 496 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 RBMY1CP0DJD4 496 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 COL5A1-AS1Q5SY13 56 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 SAMD13Q5VXD3 122 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 Q8NAQ8 132 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.95
CHRNA1-205ENST00000409542 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
CHRNA1-205ENST00000409542 HBDP02042 147 aa9.14□□□□□ -0.95
CHRNA1-205ENST00000409542 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
CHRNA1-205ENST00000409542 AGRNO00468 2067 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 HSPG2P98160 4391 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 NCR2O95944 276 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 Q6ZTC4 211 aa9.13□□□□□ -0.95
CHRNA1-205ENST00000409542 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms