RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 MSRB1Q9NZV6 116 aa14.5□□□□□ -0.09
VSX1-203ENST00000409285 A0A1B0GXF2 115 aa14.49□□□□□ -0.09
VSX1-203ENST00000409285 NANOS2P60321 138 aaKnown RBP14.49□□□□□ -0.09
VSX1-203ENST00000409285 RHODO00212 210 aa14.48□□□□□ -0.09
VSX1-203ENST00000409285 ELOBQ15370 118 aa14.48□□□□□ -0.09
VSX1-203ENST00000409285 UFSP1Q6NVU6 142 aa14.48□□□□□ -0.09
VSX1-203ENST00000409285 OR4C5Q8NGB2 326 aa14.48□□□□□ -0.09
VSX1-203ENST00000409285 ATP5G1P05496 136 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 CRYGDP07320 174 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 RASL11AQ6T310 242 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 Q6ZTC4 211 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.47□□□□□ -0.09
VSX1-203ENST00000409285 GATD1Q8NB37 220 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 YPEL4Q96NS1 127 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 JPT2Q9H910 190 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 KIF25-AS1Q9Y6Z4 181 aa14.47□□□□□ -0.09
VSX1-203ENST00000409285 S100A8P05109 93 aa14.46□□□□□ -0.09
VSX1-203ENST00000409285 SSTP61278 116 aa14.46□□□□□ -0.09
VSX1-203ENST00000409285 HBBP68871 147 aa14.46□□□□□ -0.09
VSX1-203ENST00000409285 TGIF2-C20orf24A0A0A6YYL0 155 aa14.45□□□□□ -0.1
VSX1-203ENST00000409285 ZNF479Q96JC4 524 aa14.45□□□□□ -0.1
VSX1-203ENST00000409285 WWC2-AS2Q96NR7 200 aa14.45□□□□□ -0.1
VSX1-203ENST00000409285 SAMD10Q9BYL1 202 aa14.45□□□□□ -0.1
VSX1-203ENST00000409285 TMEM191AQ9H0A3 160 aa14.45□□□□□ -0.1
VSX1-203ENST00000409285 EVI2AP22794 236 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 MRPL54Q6P161 138 aaKnown RBP14.44□□□□□ -0.1
VSX1-203ENST00000409285 SMIM15Q7Z3B0 74 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 C14orf178Q8N769 122 aaPredicted RBP14.44□□□□□ -0.1
VSX1-203ENST00000409285 DPH3P1Q9H4G8 78 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 TRBV24-1A0A075B6N3 115 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 SMIM17P0DL12 118 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 LINC00315P59091 139 aa14.44□□□□□ -0.1
VSX1-203ENST00000409285 A0A087WWL8 130 aa14.43□□□□□ -0.1
VSX1-203ENST00000409285 TRAV10A0A0B4J240 114 aa14.43□□□□□ -0.1
VSX1-203ENST00000409285 FHL2Q14192 279 aa14.43□□□□□ -0.1
VSX1-203ENST00000409285 FAM74A4Q5TZK3 123 aa14.43□□□□□ -0.1
VSX1-203ENST00000409285 COLCA2A8K830 154 aa14.42□□□□□ -0.1
VSX1-203ENST00000409285 HOXA5P20719 270 aa14.42□□□□□ -0.1
VSX1-203ENST00000409285 FAM210BQ96KR6 192 aa14.42□□□□□ -0.1
VSX1-203ENST00000409285 IGHV3-53P01767 116 aa14.41□□□□□ -0.1
VSX1-203ENST00000409285 GATA1P15976 413 aaPredicted RBP14.41□□□□□ -0.1
VSX1-203ENST00000409285 CAMPP49913 170 aa14.41□□□□□ -0.1
VSX1-203ENST00000409285 SLAQ13239 276 aa14.41□□□□□ -0.1
VSX1-203ENST00000409285 FRZBQ92765 325 aa14.41□□□□□ -0.1
VSX1-203ENST00000409285 DYNC2H1Q8NCM8 4307 aaKnown RBP14.4□□□□□ -0.1
VSX1-203ENST00000409285 DEFB131BA0A096LNP1 70 aa14.4□□□□□ -0.1
VSX1-203ENST00000409285 RAB4BP61018 213 aa14.4□□□□□ -0.1
VSX1-203ENST00000409285 COX19Q49B96 90 aa14.4□□□□□ -0.1
VSX1-203ENST00000409285 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
VSX1-203ENST00000409285 PRO0255Q9UI72 69 aa14.39□□□□□ -0.11
VSX1-203ENST00000409285 TRBV6-4A0A1B0GX49 114 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 PHLDA1Q8WV24 401 aaPredicted RBP14.38□□□□□ -0.11
VSX1-203ENST00000409285 IGHV3-73A0A0B4J1V6 119 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 F5H768 121 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 H3BNG1 76 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 RAB5AP20339 215 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 ZNF56Q15929 161 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 FAM104BQ5XKR9 115 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 HHLA3Q9XRX5 114 aa14.38□□□□□ -0.11
VSX1-203ENST00000409285 HTN3P15516 51 aa14.37□□□□□ -0.11
VSX1-203ENST00000409285 CRYBA4P53673 196 aa14.37□□□□□ -0.11
VSX1-203ENST00000409285 GNB1LQ9BYB4 327 aa14.37□□□□□ -0.11
VSX1-203ENST00000409285 MGPP08493 103 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 RAB4AP20338 218 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 TMEM136Q6ZRR5 245 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 Q6ZSN1 163 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 AMN1Q8IY45 258 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 SLC25A29Q8N8R3 303 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 RNF185Q96GF1 192 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 STARD9Q9P2P6 4700 aa14.36□□□□□ -0.11
VSX1-203ENST00000409285 TENM2Q9NT68 2774 aa14.35□□□□□ -0.11
VSX1-203ENST00000409285 HLA-DQA1P01909 254 aa14.35□□□□□ -0.11
VSX1-203ENST00000409285 MT-ND6P03923 174 aa14.35□□□□□ -0.11
VSX1-203ENST00000409285 RHOHQ15669 191 aa14.35□□□□□ -0.11
VSX1-203ENST00000409285 TRBV10-1A0A0K0K1A3 114 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 NUPR2A6NF83 97 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 F5H697 171 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 H7C1H1 209 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 K7EQD1 137 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 RPS10P46783 165 aaKnown RBP14.34□□□□□ -0.11
VSX1-203ENST00000409285 SUMO4Q6EEV6 95 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 MRAP2Q96G30 205 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 VSIG2Q96IQ7 327 aa14.34□□□□□ -0.11
VSX1-203ENST00000409285 TRAV26-1A0A087WT03 109 aa14.33□□□□□ -0.12
VSX1-203ENST00000409285 M0QY20 66 aa14.33□□□□□ -0.12
VSX1-203ENST00000409285 MUC7Q8TAX7 377 aa14.33□□□□□ -0.12
VSX1-203ENST00000409285 PAX4O43316 350 aa14.31□□□□□ -0.12
VSX1-203ENST00000409285 MRPL51Q4U2R6 128 aaKnown RBP14.31□□□□□ -0.12
VSX1-203ENST00000409285 CEMP1Q6PRD7 247 aaPredicted RBP14.31□□□□□ -0.12
VSX1-203ENST00000409285 PRADC1Q9BSG0 188 aa14.31□□□□□ -0.12
VSX1-203ENST00000409285 PPBPP02775 128 aa14.3□□□□□ -0.12
VSX1-203ENST00000409285 TRAV26-2A0A0B4J265 109 aa14.29□□□□□ -0.12
VSX1-203ENST00000409285 LINC00694P0DN24 101 aa14.29□□□□□ -0.12
VSX1-203ENST00000409285 C15orf53Q8NAA6 179 aa14.29□□□□□ -0.12
VSX1-203ENST00000409285 TRAPPC1Q9Y5R8 145 aa14.29□□□□□ -0.12
VSX1-203ENST00000409285 DNAJC30Q96LL9 226 aa14.28□□□□□ -0.12
VSX1-203ENST00000409285 NIT2Q9NQR4 276 aa14.28□□□□□ -0.12
VSX1-203ENST00000409285 KLK5Q9Y337 293 aaPredicted RBP14.28□□□□□ -0.12
VSX1-203ENST00000409285 A0A0J9YY99 117 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 C3orf84H3BNL1 204 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms