RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TMUB2Q71RG4 321 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 BAGE2Q86Y30 109 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 RMI2Q96E14 147 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
SNORD88A-201ENST00000408314 TMSB15BA0A087X1C1 80 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 A0A1B0GV50 99 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 LINC00694P0DN24 101 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 CRIP1P50238 77 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 PKIAP61925 76 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 RPL36AP83881 106 aaKnown RBP6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 ELOBQ15370 118 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 RPL36ALQ969Q0 106 aaKnown RBP6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 CHCHD7Q9BUK0 85 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
SNORD88A-201ENST00000408314 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 SCO2A0A1W2PP80 73 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 DMRTA1Q5VZB9 504 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 UFSP1Q6NVU6 142 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 Q8N1X5 172 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 C11orf52Q96A22 123 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 SMIM12Q96EX1 92 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 Q9HAA7 133 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 BIN3Q9NQY0 253 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 HSPG2P98160 4391 aa6.12□□□□□ -1.43
SNORD88A-201ENST00000408314 A0A087WX48 190 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 XKRY2A2RUG3 117 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 PDE6DO43924 150 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 OR5AL1P0C617 328 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 SMIM17P0DL12 118 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 TAGLN2P37802 199 aaKnown RBP6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 RPS20P60866 119 aaKnown RBP6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 RAB4BP61018 213 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 TMEM97Q5BJF2 176 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 SLC51BQ86UW2 128 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 TCTE3Q8IZS6 198 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 DAZAP1Q96EP5 407 aaKnown RBP6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 MLST8Q9BVC4 326 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 SAMD10Q9BYL1 202 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 KRTAP17-1Q9BYP8 105 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 GNG13Q9P2W3 67 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
SNORD88A-201ENST00000408314 TRBV7-3A0A075B6L6 115 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 A0A087WWL8 130 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 SNAI2O43623 268 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 GCSHP23434 173 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 RPL35P42766 123 aaKnown RBP6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 SULT1A2P50226 295 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 ZNF56Q15929 161 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 PRR27Q6MZM9 219 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 Q6ZSN1 163 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 C14orf178Q8N769 122 aaPredicted RBP6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 OR10G8Q8NGN5 311 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 JPT2Q9H910 190 aa6.1□□□□□ -1.43
SNORD88A-201ENST00000408314 H7C1H1 209 aa6.09□□□□□ -1.43
SNORD88A-201ENST00000408314 GNG4P50150 75 aa6.09□□□□□ -1.43
SNORD88A-201ENST00000408314 Q8N814 137 aa6.09□□□□□ -1.43
SNORD88A-201ENST00000408314 SSBP4Q9BWG4 385 aaPredicted RBP6.09□□□□□ -1.43
SNORD88A-201ENST00000408314 RBFOX3A6NFN3 312 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 EPM2AB3EWF7 344 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 F5H697 171 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 C1QBP02746 253 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 UBE2D3P61077 147 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 UBE2D2P62837 147 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 CACNG7P62955 275 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 CCL20P78556 96 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 Q0VG73 95 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 CENPWQ5EE01 88 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 NIT1Q86X76 327 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 OR10AG1Q8NH19 301 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 FRZBQ92765 325 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
SNORD88A-201ENST00000408314 LRCOL1A6NCL2 159 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 P01737 135 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 CRPP02741 224 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 BCL2P10415 239 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 RPL19P84098 196 aaKnown RBP6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 DAZ4Q86SG3 579 aaKnown RBP6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 FER1L6-AS1Q8NA97 138 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 OR2D3Q8NGH3 330 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 DAZ3Q9NR90 486 aaKnown RBP6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 MED9Q9NWA0 146 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 VAX2Q9UIW0 290 aa6.07□□□□□ -1.44
SNORD88A-201ENST00000408314 TRBV6-8A0A0A6YYG3 113 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 F2Z2F3 143 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 TRGC1P0CF51 173 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 AKAP14Q86UN6 197 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 DNAJC30Q96LL9 226 aa6.06□□□□□ -1.44
SNORD88A-201ENST00000408314 DERL1Q9BUN8 251 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms