RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 MED13Q9UHV7 2174 aa6.97□□□□□ -1.29
PSEN1-205ENST00000406768 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
PSEN1-205ENST00000406768 ZNF71Q9NQZ8 489 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-205ENST00000406768 A0A0J9YXY3 114 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 I3L2K1 104 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 SPRNQ5BIV9 151 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 PIP4P1Q86T03 277 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 RNF5Q99942 180 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 NCKAP5O14513 1909 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 TRBV7-1A0A0A6YYK4 115 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 LPAL2Q16609 132 aa6.96□□□□□ -1.29
PSEN1-205ENST00000406768 MBD3L2Q8NHZ7 208 aaPredicted RBP6.96□□□□□ -1.29
PSEN1-205ENST00000406768 CNOT1A5YKK6 2376 aaKnown RBP6.96□□□□□ -1.3
PSEN1-205ENST00000406768 TNFRSF13BO14836 293 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-205ENST00000406768 C9orf139Q6ZV77 190 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 NRACQ8N912 160 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 RITA1Q96K30 269 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 TOMM7Q9P0U1 55 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 POLEQ07864 2286 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 TEX36Q5VZQ5 186 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 KIR2DL5BQ8NHK3 375 aa6.96□□□□□ -1.3
PSEN1-205ENST00000406768 MKI67P46013 3256 aaKnown RBP6.95□□□□□ -1.3
PSEN1-205ENST00000406768 IGKV3-20P01619 116 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 CREBBPQ92793 2442 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 PSMB8P28062 276 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 NACAE9PAV3 2078 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 HOXD3P31249 432 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-205ENST00000406768 LINC00311Q8N616 119 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 C20orf173Q96LM9 149 aa6.95□□□□□ -1.3
PSEN1-205ENST00000406768 K7EIM0 57 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 COX7A2LO14548 114 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 Q0VFX4 171 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 C15orf32Q32M92 178 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 DAND5Q8N907 189 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 C17orf100A8MU93 164 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 CACNA1EQ15878 2313 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 PRAC2D3DTV9 90 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 HAMPP81172 84 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 MIAQ16674 131 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 SPRR3Q9UBC9 169 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 PYGO1Q9Y3Y4 419 aa6.94□□□□□ -1.3
PSEN1-205ENST00000406768 SPTBN4Q9H254 2564 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 TNRC6BQ9UPQ9 1833 aaKnown RBP6.93□□□□□ -1.3
PSEN1-205ENST00000406768 APC2O95996 2303 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 WT1P19544 449 aaPredicted RBP6.93□□□□□ -1.3
PSEN1-205ENST00000406768 CNFNQ9BYD5 112 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 A0A0G2JNJ9 132 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 CGB3P0DN86 165 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 CGB7P0DN87 165 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 C9orf106Q8NAJ2 232 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 Q9UFV3 132 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 BUB1B-PAK6H3BSN5 160 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 LINC00158P58513 81 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 SAP25Q8TEE9 199 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
PSEN1-205ENST00000406768 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 PAX4O43316 350 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 IGLV2-23P01705 113 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 FSTL3O95633 263 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-205ENST00000406768 TIRAPP58753 221 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 VSIG2Q96IQ7 327 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 WISP2O76076 250 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 Q9HAA7 133 aa6.92□□□□□ -1.3
PSEN1-205ENST00000406768 F8WDY8 70 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 GATA4P43694 442 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 PAX8Q06710 450 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
PSEN1-205ENST00000406768 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 OPRPNQ99935 248 aaPredicted RBP6.91□□□□□ -1.3
PSEN1-205ENST00000406768 SIT1Q9Y3P8 196 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 ATRXP46100 2492 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 IGLV2-18A0A075B6J9 118 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 GNRH2O43555 120 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 FANCD2OSQ96PS1 177 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 UBE2L6O14933 153 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 Q9H8V8 135 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 CTSZQ9UBR2 303 aa6.91□□□□□ -1.3
PSEN1-205ENST00000406768 GVINP1Q7Z2Y8 2422 aa6.9□□□□□ -1.3
PSEN1-205ENST00000406768 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
PSEN1-205ENST00000406768 SUMO4Q6EEV6 95 aa6.9□□□□□ -1.3
PSEN1-205ENST00000406768 LOXP28300 417 aaPredicted RBP6.9□□□□□ -1.31
PSEN1-205ENST00000406768 TMEM61Q8N0U2 210 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 MALRD1Q5VYJ5 2156 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 NCOR2Q9Y618 2525 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 C10orf142B7Z368 130 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 TEX22C9J3V5 150 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 IGHV1-69P01742 117 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 COX6B1P14854 86 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 TSPEAR-AS2P59090 65 aa6.9□□□□□ -1.31
PSEN1-205ENST00000406768 LYPD2Q6UXB3 125 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms