RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ST20Q9HBF5 79 aa18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 LGALS9BQ3B8N2 356 aa18.16■□□□□ 0.5
DNMT3A-206ENST00000406659 NSUN5P1Q3KNT7 163 aa18.16■□□□□ 0.5
DNMT3A-206ENST00000406659 LGALS9CQ6DKI2 356 aa18.16■□□□□ 0.5
DNMT3A-206ENST00000406659 C18orf15Q96N68 181 aa18.16■□□□□ 0.5
DNMT3A-206ENST00000406659 A0A087WWL8 130 aa18.15■□□□□ 0.5
DNMT3A-206ENST00000406659 M0R143 59 aa18.14■□□□□ 0.5
DNMT3A-206ENST00000406659 Q6ZN92 141 aa18.14■□□□□ 0.5
DNMT3A-206ENST00000406659 GOLT1BQ9Y3E0 138 aa18.14■□□□□ 0.5
DNMT3A-206ENST00000406659 F5H697 171 aa18.14■□□□□ 0.49
DNMT3A-206ENST00000406659 HTN1P15515 57 aa18.14■□□□□ 0.49
DNMT3A-206ENST00000406659 ODF3L2Q3SX64 289 aa18.14■□□□□ 0.49
DNMT3A-206ENST00000406659 LBHQ53QV2 105 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-206ENST00000406659 SAP30O75446 220 aa18.13■□□□□ 0.49
DNMT3A-206ENST00000406659 ADARB2-AS1A8MUL3 147 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 SUMO4Q6EEV6 95 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 CLUHP3Q96NS8 147 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 WNK1Q9H4A3 2382 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 OR11H12B2RN74 326 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 INAFM1C9JVW0 142 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 EREGO14944 169 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 NUDT3O95989 172 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 HNRNPA3P51991 378 aaKnown RBP18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 MRPL52Q86TS9 123 aaKnown RBP18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 SNHG12Q9BXW3 62 aa18.12■□□□□ 0.49
DNMT3A-206ENST00000406659 CUBNO60494 3623 aa18.11■□□□□ 0.49
DNMT3A-206ENST00000406659 ZNF876PQ49A33 203 aa18.11■□□□□ 0.49
DNMT3A-206ENST00000406659 ORMDL2Q53FV1 153 aa18.11■□□□□ 0.49
DNMT3A-206ENST00000406659 FAM74A4Q5TZK3 123 aa18.11■□□□□ 0.49
DNMT3A-206ENST00000406659 STHQ8IWL8 128 aa18.11■□□□□ 0.49
DNMT3A-206ENST00000406659 NOTCH2Q04721 2471 aa18.1■□□□□ 0.49
DNMT3A-206ENST00000406659 K7EMI3 77 aa18.1■□□□□ 0.49
DNMT3A-206ENST00000406659 ATP5LO75964 103 aa18.1■□□□□ 0.49
DNMT3A-206ENST00000406659 INSP01308 110 aa18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 C2orf88Q9BSF0 95 aa18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 CSTL1Q9H114 145 aa18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 PRSS1P07477 247 aa18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 CMC4P56277 68 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 LINC01587Q99440 93 aa18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 SETD2Q9BYW2 2564 aaPredicted RBP18.09■□□□□ 0.49
DNMT3A-206ENST00000406659 CRYGDP07320 174 aa18.07■□□□□ 0.48
DNMT3A-206ENST00000406659 ZNF56Q15929 161 aa18.07■□□□□ 0.48
DNMT3A-206ENST00000406659 RPL32P62910 135 aaKnown RBP18.07■□□□□ 0.48
DNMT3A-206ENST00000406659 NDUFA11Q86Y39 141 aa18.07■□□□□ 0.48
DNMT3A-206ENST00000406659 LINC00467Q9BRT7 94 aa18.07■□□□□ 0.48
DNMT3A-206ENST00000406659 ZNF415Q09FC8 603 aa18.06■□□□□ 0.48
DNMT3A-206ENST00000406659 OTOGQ6ZRI0 2925 aa18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 IGLV1-51P01701 117 aa18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 KRTAP10-3P60369 221 aa18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 DKK2Q9UBU2 259 aa18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 TRPT1Q86TN4 253 aaKnown RBP18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 XCL2Q9UBD3 114 aa18.04■□□□□ 0.48
DNMT3A-206ENST00000406659 PRM2P04554 102 aa18.03■□□□□ 0.48
DNMT3A-206ENST00000406659 FOSL1P15407 271 aa18.03■□□□□ 0.48
DNMT3A-206ENST00000406659 SLC25A34Q6PIV7 304 aa18.03■□□□□ 0.48
DNMT3A-206ENST00000406659 TOMM6Q96B49 74 aa18.03■□□□□ 0.48
DNMT3A-206ENST00000406659 MRPS16Q9Y3D3 137 aaKnown RBP18.03■□□□□ 0.48
DNMT3A-206ENST00000406659 M0R2P5 195 aa18.02■□□□□ 0.48
DNMT3A-206ENST00000406659 VCYO14598 125 aa18.02■□□□□ 0.48
DNMT3A-206ENST00000406659 POLR2KP53803 58 aaKnown RBP18.02■□□□□ 0.48
DNMT3A-206ENST00000406659 ODF1Q14990 250 aa18.02■□□□□ 0.48
DNMT3A-206ENST00000406659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.02■□□□□ 0.47
DNMT3A-206ENST00000406659 M0QY20 66 aa18.02■□□□□ 0.47
DNMT3A-206ENST00000406659 NUTF2P61970 127 aaKnown RBP18.02■□□□□ 0.47
DNMT3A-206ENST00000406659 NEGR1Q7Z3B1 354 aa18.02■□□□□ 0.47
DNMT3A-206ENST00000406659 SCGB3A1Q96QR1 104 aa18.02■□□□□ 0.47
DNMT3A-206ENST00000406659 TRBV6-5A0A0K0K1A5 114 aa18.01■□□□□ 0.47
DNMT3A-206ENST00000406659 TMEM208Q9BTX3 173 aa18.01■□□□□ 0.47
DNMT3A-206ENST00000406659 PF4P02776 101 aa18■□□□□ 0.47
DNMT3A-206ENST00000406659 BATFQ16520 125 aa18■□□□□ 0.47
DNMT3A-206ENST00000406659 SDHAF1A6NFY7 115 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 G0S2P27469 103 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 PTH2Q96A98 100 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 KIR2DL4Q99706 377 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 SETXQ7Z333 2677 aaKnown RBP17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 PIK3CD-AS1Q5SR53 167 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 C2orf66Q6UXQ4 117 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 STPG4Q8N801 248 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 SPXQ9BT56 116 aa17.99■□□□□ 0.47
DNMT3A-206ENST00000406659 A0A1B0GV90 55 aa17.98■□□□□ 0.47
DNMT3A-206ENST00000406659 A8MWV9 139 aa17.98■□□□□ 0.47
DNMT3A-206ENST00000406659 BEAN1Q3B7T3 259 aa17.98■□□□□ 0.47
DNMT3A-206ENST00000406659 ANKRD39Q53RE8 183 aa17.98■□□□□ 0.47
DNMT3A-206ENST00000406659 ZMAT4Q9H898 229 aa17.98■□□□□ 0.47
DNMT3A-206ENST00000406659 FAM110AQ9BQ89 295 aa17.97■□□□□ 0.47
DNMT3A-206ENST00000406659 DPM2O94777 84 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 IGKCP01834 107 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 COX8AP10176 69 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 MORN3Q6PF18 240 aaPredicted RBP17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 C11orf72Q8NBR9 251 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 IGHV3OR16-12A0A075B7B8 117 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 TRBV27A0A0K0K1C4 114 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 C1orf158Q8N1D5 194 aa17.96■□□□□ 0.47
DNMT3A-206ENST00000406659 A0A087WX48 190 aa17.95■□□□□ 0.46
DNMT3A-206ENST00000406659 H7C1H1 209 aa17.95■□□□□ 0.46
DNMT3A-206ENST00000406659 ZFP2Q6ZN57 461 aa17.95■□□□□ 0.46
DNMT3A-206ENST00000406659 TP73-AS1Q9UF72 201 aa17.95■□□□□ 0.46
DNMT3A-206ENST00000406659 CRLF1O75462 422 aa17.94■□□□□ 0.46
DNMT3A-206ENST00000406659 CYSLTR1Q9Y271 337 aa17.94■□□□□ 0.46
DNMT3A-206ENST00000406659 IGHV3-73A0A0B4J1V6 119 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms