RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GAGE1Q13065 139 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 GAGE4Q13068 117 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 GAGE5Q13069 117 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 RHOHQ15669 191 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF674Q2M3X9 581 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 Q6ZNX1 250 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 COX8CQ7Z4L0 72 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 TCTE3Q8IZS6 198 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 PTH2Q96A98 100 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 PARLQ9H300 379 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 GNG13Q9P2W3 67 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.78
HMGB1P20-201ENST00000402555 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.78
HMGB1P20-201ENST00000402555 A0A087WWL8 130 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 MUC21A0A0G2JKD1 596 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 MUC21A0A140T8X8 626 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRBV6-4A0A1B0GX49 114 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 C9orf118A6NHY6 69 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 A8MWV9 139 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 M0R381 172 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 DNLZQ5SXM8 178 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 FAM74A4Q5TZK3 123 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 PRR27Q6MZM9 219 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 UFSP1Q6NVU6 142 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 BAGE2Q86Y30 109 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 TCEAL7Q9BRU2 100 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 PRADC1Q9BSG0 188 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 DERL1Q9BUN8 251 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 HSPG2P98160 4391 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 PCLOQ9Y6V0 5065 aa3.9□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRAV1-1A0A0B4J248 108 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 RAB19A4D1S5 217 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 CIDEAO60543 219 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 C1QBP02746 253 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 CRYGDP07320 174 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 LINC00694P0DN24 101 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 MGST1P10620 155 aaKnown RBP3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 BTF3P20290 206 aaKnown RBP3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 EVI2AP22794 236 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 SULT1A2P50226 295 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 TIRAPP58753 221 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 SSTP61278 116 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 C21orf62-AS1Q17RA5 79 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 OR10J3Q5JRS4 329 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 ZFP2Q6ZN57 461 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 SH2D6Q7Z4S9 175 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 AKAP14Q86UN6 197 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 ATP6V0E2Q8NHE4 81 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 MLST8Q9BVC4 326 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 GTSF1LQ9H1H1 148 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 SCRT2Q9NQ03 307 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 MANBALQ9NQG1 85 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 MSRB1Q9NZV6 116 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 PHLDA3Q9Y5J5 127 aa3.89□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRAV9-2A0A087WT02 112 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRAV8-6A0A0B4J262 113 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGHV3-38A0A0C4DH36 116 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 S100A9P06702 114 aaKnown RBP3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 RAB5CP51148 216 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 CENPWQ5EE01 88 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 PIK3CD-AS1Q5SR53 167 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 LELP1Q5T871 98 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 EIF5AL1Q6IS14 154 aaKnown RBP3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 SLC51BQ86UW2 128 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 ZFP82Q8N141 532 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 C9orf62Q8N4C0 152 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 C11orf52Q96A22 123 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 SFRP2Q96HF1 295 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 Q9HAA7 133 aa3.88□□□□□ -1.79
HMGB1P20-201ENST00000402555 A0A087WTM6 91 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 A0A1B0GVG6 124 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 RBFOX3A6NFN3 312 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 RHODO00212 210 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 IGLV2-8P01709 118 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 GZMBP10144 247 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 BCL2P10415 239 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 NKX2-5P52952 324 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 ERVFC1-1P60608 527 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 MEF2BQ02080 365 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 LINC01556Q5JQF7 62 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 NFE4Q86UQ8 179 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 MED9Q9NWA0 146 aa3.87□□□□□ -1.79
HMGB1P20-201ENST00000402555 TRBV20OR9-2A0A075B6H5 130 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 IBA57-AS1B1ANH7 110 aa3.86□□□□□ -1.79
HMGB1P20-201ENST00000402555 TEX46H3BTG2 121 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms