RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CRIPAKQ8N1N5 446 aa6.59□□□□□ -1.35
CHD8-201ENST00000399982 DIRC1Q969H9 104 aa6.59□□□□□ -1.35
CHD8-201ENST00000399982 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
CHD8-201ENST00000399982 ODF1Q14990 250 aa6.59□□□□□ -1.35
CHD8-201ENST00000399982 ZNF491Q8N8L2 437 aa6.59□□□□□ -1.35
CHD8-201ENST00000399982 TCF20Q9UGU0 1960 aaKnown RBP6.59□□□□□ -1.36
CHD8-201ENST00000399982 IGKV1-16P04430 117 aa6.59□□□□□ -1.36
CHD8-201ENST00000399982 TNCP24821 2201 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 WI2-2373I1.2A0A1W2PRP0 233 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 PRR30Q53SZ7 412 aaPredicted RBP6.58□□□□□ -1.36
CHD8-201ENST00000399982 BRCA1P38398 1863 aaKnown RBP6.58□□□□□ -1.36
CHD8-201ENST00000399982 MSMBP08118 114 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 Q0VFX4 171 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 SHANK3Q9BYB0 1731 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 NUPR1O60356 82 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 MLANAQ16655 118 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 IGKV2-24A0A0C4DH68 120 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 Q6ZSR3 168 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 PKDREJQ9NTG1 2253 aa6.58□□□□□ -1.36
CHD8-201ENST00000399982 UBR3Q6ZT12 1888 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 TRIOBPQ9H2D6 2365 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 WISP1O95388 367 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 UBE2D3P61077 147 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 ARTNQ5T4W7 220 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 GATA3P23771 443 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 BPY2O14599 106 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 NDUFA1O15239 70 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 C5orf63A6NC05 138 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 COL8A2P25067 703 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 C17orf82Q86X59 251 aaPredicted RBP6.57□□□□□ -1.36
CHD8-201ENST00000399982 CACNA1GO43497 2377 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 DAND5Q8N907 189 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 ELANEP08246 267 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 C1orf195Q5TG92 126 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 ADAMTSL1Q8N6G6 1762 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 CEP290O15078 2479 aa6.57□□□□□ -1.36
CHD8-201ENST00000399982 LYPD2Q6UXB3 125 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 ZSWIM8A7E2V4 1837 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 CCL24O00175 119 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 HIST2H2BDQ6DRA6 164 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 SPART-AS1P0CW21 52 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 COX7CP15954 63 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 C15orf65H3BRN8 121 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 PLXNA3P51805 1871 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 LINC00205P59089 165 aa6.56□□□□□ -1.36
CHD8-201ENST00000399982 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 A0A0G2JNJ9 132 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 A0A1B0GXF2 115 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 DAZ2Q13117 558 aaKnown RBP6.55□□□□□ -1.36
CHD8-201ENST00000399982 ASPHD1Q5U4P2 390 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 Q6ZVQ6 151 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 DAZ4Q86SG3 579 aaKnown RBP6.55□□□□□ -1.36
CHD8-201ENST00000399982 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 DAZ3Q9NR90 486 aaKnown RBP6.55□□□□□ -1.36
CHD8-201ENST00000399982 Q9UFV3 132 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 G3V318 75 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 APRG1Q8IVJ8 170 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 GNRH2O43555 120 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 GP9P14770 177 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 A0A087WZ39 114 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
CHD8-201ENST00000399982 TCL1BO95988 128 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 MIAQ16674 131 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 K7EQD1 137 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 LECT2O14960 151 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 B3GALT5-AS1P59052 145 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 IGLC6P0CF74 106 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 KAAG1Q9UBP8 84 aa6.54□□□□□ -1.36
CHD8-201ENST00000399982 ZNRD1Q9P1U0 126 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 HELZP42694 1942 aaKnown RBP6.53□□□□□ -1.36
CHD8-201ENST00000399982 MED12LQ86YW9 2145 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 C16orf74Q96GX8 76 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 DEFB136Q30KP8 78 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 SHANK1Q9Y566 2161 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 LOXL1Q08397 574 aaPredicted RBP6.53□□□□□ -1.36
CHD8-201ENST00000399982 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 PLXNA4Q9HCM2 1894 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 MDFICQ9P1T7 246 aa6.53□□□□□ -1.36
CHD8-201ENST00000399982 FGF23Q9GZV9 251 aaPredicted RBP6.52□□□□□ -1.36
CHD8-201ENST00000399982 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 COX7BP24311 80 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 C17orf58Q2M2W7 97 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 DEFB4AO15263 64 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 SBF1O95248 1867 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 FAM19A1Q7Z5A9 133 aa6.52□□□□□ -1.37
CHD8-201ENST00000399982 SIRPDQ9H106 197 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms