RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 ALKAL2Q6UX46 152 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 ZFP2Q6ZN57 461 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 Q6ZSN1 163 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 OR10AG1Q8NH19 301 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 TPPP3Q9BW30 176 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 DYNC1H1Q14204 4646 aaKnown RBP5.74□□□□□ -1.49
USP16-202ENST00000399973 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 TRAV8-6A0A0B4J262 113 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 A0A1B0GVG6 124 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 RAB19A4D1S5 217 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 C16orf90A8MZG2 172 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 PDE6DO43924 150 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 GNG4P50150 75 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 NKX2-5P52952 324 aaPredicted RBP5.73□□□□□ -1.49
USP16-202ENST00000399973 ZNF56Q15929 161 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 SPANXN1Q5VSR9 72 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
USP16-202ENST00000399973 ATP6V0E2Q8NHE4 81 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 MED9Q9NWA0 146 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
USP16-202ENST00000399973 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 IGHV3-30P01768 117 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 IGHV3-33P01772 117 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 CRYGDP07320 174 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 DNAH10OSP0CZ25 163 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 IGHV3-30-3P0DP02 117 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 IGHV3-30-5P0DP03 117 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 ERVFC1-1P60608 527 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 SPATA12Q7Z6I5 190 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 DAZAP1Q96EP5 407 aaKnown RBP5.72□□□□□ -1.49
USP16-202ENST00000399973 SFRP2Q96HF1 295 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 MLST8Q9BVC4 326 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 GTSF1LQ9H1H1 148 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 Q9HAA7 133 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 SCRT2Q9NQ03 307 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 MSRB1Q9NZV6 116 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 VAX2Q9UIW0 290 aa5.72□□□□□ -1.49
USP16-202ENST00000399973 CXCL1P09341 107 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 GZMBP10144 247 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 CEBPGP53567 150 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 TIRAPP58753 221 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 LELP1Q5T871 98 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 UFSP1Q6NVU6 142 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 NFE4Q86UQ8 179 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 C10orf126Q8N4M7 172 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 OR2D3Q8NGH3 330 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 Q9UF83 564 aa5.71□□□□□ -1.5
USP16-202ENST00000399973 TRBV20OR9-2A0A075B6H5 130 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 EREGO14944 169 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 PSCAO43653 123 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 P01737 135 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 MGPP08493 103 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 SMIM17P0DL12 118 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 LINC00694P0DN24 101 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 BTF3P20290 206 aaKnown RBP5.7□□□□□ -1.5
USP16-202ENST00000399973 TAGLN2P37802 199 aaKnown RBP5.7□□□□□ -1.5
USP16-202ENST00000399973 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
USP16-202ENST00000399973 FER1L6-AS1Q8NA97 138 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 AP1S3Q96PC3 154 aa5.7□□□□□ -1.5
USP16-202ENST00000399973 RBFOX3A6NFN3 312 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 F5H697 171 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 SNAI2O43623 268 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 IGLV2-8P01709 118 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 OR5AL1P0C617 328 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 FUSP35637 526 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP16-202ENST00000399973 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 RPS20P60866 119 aaKnown RBP5.69□□□□□ -1.5
USP16-202ENST00000399973 RPL36AP83881 106 aaKnown RBP5.69□□□□□ -1.5
USP16-202ENST00000399973 LINC01556Q5JQF7 62 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 TOR2AQ5JU69 321 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 Q8N3U1 123 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 RPL36ALQ969Q0 106 aaKnown RBP5.69□□□□□ -1.5
USP16-202ENST00000399973 SMIM12Q96EX1 92 aa5.69□□□□□ -1.5
USP16-202ENST00000399973 A0A087WWC5 75 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 XKRY2A2RUG3 117 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 C19orf71A6NCJ1 209 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 A6NJY4 79 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 K7EP13 123 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 BIN3Q9NQY0 253 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 URGCP-MRPS24S4R325 110 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 RYR1P21817 5038 aa5.68□□□□□ -1.5
USP16-202ENST00000399973 TRBV10-1A0A0K0K1A3 114 aa5.67□□□□□ -1.5
USP16-202ENST00000399973 IGLC6P0CF74 106 aa5.67□□□□□ -1.5
USP16-202ENST00000399973 RAB4BP61018 213 aa5.67□□□□□ -1.5
USP16-202ENST00000399973 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
USP16-202ENST00000399973 EIF5A2Q9GZV4 153 aaKnown RBP5.67□□□□□ -1.5
USP16-202ENST00000399973 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
USP16-202ENST00000399973 RPP21Q9H633 154 aaKnown RBP5.67□□□□□ -1.5
USP16-202ENST00000399973 TRBV7-3A0A075B6L6 115 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 A0A087WTM6 91 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 IBA57-AS1B1ANH7 110 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 K7EN84 100 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 UBE2D3P61077 147 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 UBE2D2P62837 147 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 CACNG7P62955 275 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 KCNIP4Q6PIL6 250 aa5.66□□□□□ -1.5
USP16-202ENST00000399973 LYZL1Q6UWQ5 148 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms