RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FAM231BA6NCW3 169 aa2.54□□□□□ -2
KNL1-202ENST00000399668 NPSP0C0P6 89 aa2.54□□□□□ -2
KNL1-202ENST00000399668 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
KNL1-202ENST00000399668 ZFAND6Q6FIF0 208 aa2.54□□□□□ -2
KNL1-202ENST00000399668 C2orf66Q6UXQ4 117 aa2.54□□□□□ -2
KNL1-202ENST00000399668 ADAMTSL5Q6ZMM2 481 aa2.54□□□□□ -2
KNL1-202ENST00000399668 ODF3L1Q8IXM7 274 aa2.54□□□□□ -2
KNL1-202ENST00000399668 Q8N9W7 124 aa2.54□□□□□ -2
KNL1-202ENST00000399668 VPREB3Q9UKI3 123 aa2.54□□□□□ -2
KNL1-202ENST00000399668 FGF6P10767 208 aa2.54□□□□□ -2
KNL1-202ENST00000399668 DEFB1P60022 68 aa2.54□□□□□ -2
KNL1-202ENST00000399668 POU2AF1Q16633 256 aa2.54□□□□□ -2
KNL1-202ENST00000399668 LY6G5BQ8NDX9 201 aa2.54□□□□□ -2
KNL1-202ENST00000399668 ANAPC13Q9BS18 74 aa2.54□□□□□ -2
KNL1-202ENST00000399668 EDA2RQ9HAV5 297 aa2.54□□□□□ -2
KNL1-202ENST00000399668 NF1P21359 2839 aa2.54□□□□□ -2
KNL1-202ENST00000399668 H3BMG7 143 aa2.54□□□□□ -2
KNL1-202ENST00000399668 SPINK8P0C7L1 97 aa2.54□□□□□ -2
KNL1-202ENST00000399668 PRR20EP86478 221 aa2.54□□□□□ -2
KNL1-202ENST00000399668 PRR20CP86479 221 aa2.54□□□□□ -2
KNL1-202ENST00000399668 PRR20DP86480 221 aa2.54□□□□□ -2
KNL1-202ENST00000399668 PRR20BP86481 221 aa2.54□□□□□ -2
KNL1-202ENST00000399668 PRR20AP86496 221 aa2.54□□□□□ -2
KNL1-202ENST00000399668 CEND1Q8N111 149 aa2.54□□□□□ -2
KNL1-202ENST00000399668 Q8NA96 180 aa2.54□□□□□ -2
KNL1-202ENST00000399668 MRPL53Q96EL3 112 aaKnown RBP2.54□□□□□ -2
KNL1-202ENST00000399668 TMEM243Q9BU79 118 aa2.54□□□□□ -2
KNL1-202ENST00000399668 TSSC4Q9Y5U2 329 aaPredicted RBP2.54□□□□□ -2
KNL1-202ENST00000399668 NPYP01303 97 aa2.54□□□□□ -2
KNL1-202ENST00000399668 COX8AP10176 69 aa2.54□□□□□ -2
KNL1-202ENST00000399668 RNF138Q8WVD3 245 aa2.54□□□□□ -2
KNL1-202ENST00000399668 RASL10AQ92737 203 aa2.54□□□□□ -2
KNL1-202ENST00000399668 FAM167A-AS1Q96KT0 104 aa2.54□□□□□ -2
KNL1-202ENST00000399668 ZNF492Q9P255 531 aa2.54□□□□□ -2
KNL1-202ENST00000399668 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
KNL1-202ENST00000399668 EREGO14944 169 aa2.54□□□□□ -2
KNL1-202ENST00000399668 LTAP01374 205 aa2.54□□□□□ -2
KNL1-202ENST00000399668 IGKV1-17P01599 117 aa2.54□□□□□ -2
KNL1-202ENST00000399668 XCL1P47992 114 aa2.54□□□□□ -2
KNL1-202ENST00000399668 MSMPQ1L6U9 139 aa2.54□□□□□ -2
KNL1-202ENST00000399668 TMEM190Q8WZ59 177 aa2.54□□□□□ -2
KNL1-202ENST00000399668 CFHR4Q92496 578 aa2.54□□□□□ -2
KNL1-202ENST00000399668 ZNF48Q96MX3 618 aaPredicted RBP2.54□□□□□ -2
KNL1-202ENST00000399668 U3KQE9 123 aa2.54□□□□□ -2
KNL1-202ENST00000399668 VPS13CQ709C8 3753 aa2.54□□□□□ -2
KNL1-202ENST00000399668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.53□□□□□ -2
KNL1-202ENST00000399668 IGKV2-29A2NJV5 120 aaPredicted RBP2.53□□□□□ -2
KNL1-202ENST00000399668 LGALS1P09382 135 aaKnown RBP2.53□□□□□ -2
KNL1-202ENST00000399668 ZFP36P26651 326 aaKnown RBP2.53□□□□□ -2
KNL1-202ENST00000399668 PCP2Q8IVA1 136 aa2.53□□□□□ -2
KNL1-202ENST00000399668 ATP6V0BQ99437 205 aa2.53□□□□□ -2
KNL1-202ENST00000399668 J3QLI3 93 aa2.53□□□□□ -2
KNL1-202ENST00000399668 BUB3O43684 328 aa2.53□□□□□ -2
KNL1-202ENST00000399668 IGLV2-23P01705 113 aa2.53□□□□□ -2
KNL1-202ENST00000399668 APOC4P55056 127 aa2.53□□□□□ -2
KNL1-202ENST00000399668 GAGE2BQ13066 116 aa2.53□□□□□ -2
KNL1-202ENST00000399668 DEFB113Q30KQ7 82 aa2.53□□□□□ -2
KNL1-202ENST00000399668 GAGE2EQ4V326 116 aa2.53□□□□□ -2
KNL1-202ENST00000399668 GTSF1Q8WW33 167 aa2.53□□□□□ -2
KNL1-202ENST00000399668 TMEM141Q96I45 108 aa2.53□□□□□ -2
KNL1-202ENST00000399668 GAGE2DQ9UEU5 116 aa2.53□□□□□ -2
KNL1-202ENST00000399668 I3L2K1 104 aa2.53□□□□□ -2
KNL1-202ENST00000399668 TRBV12-3P01733 135 aa2.53□□□□□ -2
KNL1-202ENST00000399668 IGLC2P0DOY2 106 aa2.53□□□□□ -2
KNL1-202ENST00000399668 IGLC3P0DOY3 106 aa2.53□□□□□ -2
KNL1-202ENST00000399668 Q8N8P6 123 aa2.53□□□□□ -2
KNL1-202ENST00000399668 ZNF561-AS1K7EIQ3 104 aa2.53□□□□□ -2
KNL1-202ENST00000399668 NUPR1O60356 82 aa2.53□□□□□ -2
KNL1-202ENST00000399668 C22orf34Q6ZV56 151 aa2.53□□□□□ -2
KNL1-202ENST00000399668 FAM231DQ6ZW35 169 aa2.53□□□□□ -2
KNL1-202ENST00000399668 LYPD6Q86Y78 171 aa2.53□□□□□ -2
KNL1-202ENST00000399668 AJUBAQ96IF1 538 aa2.53□□□□□ -2
KNL1-202ENST00000399668 SMIM2Q9BVW6 85 aa2.53□□□□□ -2
KNL1-202ENST00000399668 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -22e-6■■■□□ 17.6
KNL1-202ENST00000399668 IGLV11-55A0A075B6I3 123 aa2.53□□□□□ -2
KNL1-202ENST00000399668 C9orf118A6NHY6 69 aa2.53□□□□□ -2
KNL1-202ENST00000399668 CD5LO43866 347 aa2.53□□□□□ -2
KNL1-202ENST00000399668 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
KNL1-202ENST00000399668 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
KNL1-202ENST00000399668 PYGO2Q9BRQ0 406 aa2.53□□□□□ -2
KNL1-202ENST00000399668 NOTCH1P46531 2555 aa2.53□□□□□ -2
KNL1-202ENST00000399668 RHODO00212 210 aa2.53□□□□□ -2
KNL1-202ENST00000399668 SUMO4Q6EEV6 95 aa2.53□□□□□ -2
KNL1-202ENST00000399668 C11orf52Q96A22 123 aa2.53□□□□□ -2
KNL1-202ENST00000399668 AGPAT4-IT1Q9H0P7 198 aa2.53□□□□□ -2
KNL1-202ENST00000399668 MSRB1Q9NZV6 116 aa2.53□□□□□ -2
KNL1-202ENST00000399668 A0A0J9YY99 117 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 J3QKU1 62 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 LINC00173Q6ZV60 143 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 NPBQ8NG41 125 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 Q9HAA7 133 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 NXPH4O95158 308 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 UTF1Q5T230 341 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 BVES-AS1Q5T3Y7 98 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 IGF2-ASQ6U949 168 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 SPRY4Q9C004 299 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 KLF2Q9Y5W3 355 aaPredicted RBP2.52□□□□□ -2.01
KNL1-202ENST00000399668 TRAV12-1A0A0B4J245 112 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 GHRHP01286 108 aa2.52□□□□□ -2.01
KNL1-202ENST00000399668 FRMD6-AS1P0C7T7 363 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms