RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GZMBP10144 247 aa12.3□□□□□ -0.44
CTNS-203ENST00000399306 RHOHQ15669 191 aa12.3□□□□□ -0.44
CTNS-203ENST00000399306 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
CTNS-203ENST00000399306 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
CTNS-203ENST00000399306 RYR2Q92736 4967 aa12.29□□□□□ -0.44
CTNS-203ENST00000399306 LINC00862A6NCI5 91 aa12.29□□□□□ -0.44
CTNS-203ENST00000399306 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
CTNS-203ENST00000399306 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
CTNS-203ENST00000399306 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
CTNS-203ENST00000399306 A0A096LPF7 62 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 LY6G6CO95867 125 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 CCL18P55774 89 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 ADIRFQ15847 76 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 AP1S3Q96PC3 154 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 JPT2Q9H910 190 aa12.28□□□□□ -0.44
CTNS-203ENST00000399306 SLC25A29Q8N8R3 303 aa12.27□□□□□ -0.45
CTNS-203ENST00000399306 OR10G8Q8NGN5 311 aa12.27□□□□□ -0.45
CTNS-203ENST00000399306 TPPP3Q9BW30 176 aa12.27□□□□□ -0.45
CTNS-203ENST00000399306 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
CTNS-203ENST00000399306 V9GYV3 84 aa12.27□□□□□ -0.45
CTNS-203ENST00000399306 KMT2AQ03164 3969 aa12.26□□□□□ -0.45
CTNS-203ENST00000399306 TRGC1P0CF51 173 aa12.26□□□□□ -0.45
CTNS-203ENST00000399306 RAB4BP61018 213 aa12.26□□□□□ -0.45
CTNS-203ENST00000399306 NEGR1Q7Z3B1 354 aa12.26□□□□□ -0.45
CTNS-203ENST00000399306 GTSF1Q8WW33 167 aa12.26□□□□□ -0.45
CTNS-203ENST00000399306 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
CTNS-203ENST00000399306 K7EQD1 137 aa12.25□□□□□ -0.45
CTNS-203ENST00000399306 GYPEP15421 78 aa12.25□□□□□ -0.45
CTNS-203ENST00000399306 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
CTNS-203ENST00000399306 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 PPP1R2P9O14990 202 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 SRIP30626 198 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 TIRAPP58753 221 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 UBE2DNLQ8IWF7 75 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
CTNS-203ENST00000399306 A0A087WWL8 130 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 NTF3P20783 257 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 FAM74A4Q5TZK3 123 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
CTNS-203ENST00000399306 RYR3Q15413 4870 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 MUC21A0A0G2JKD1 596 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 MUC21A0A140T8X8 626 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 LINC00315P59091 139 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 ESRGQ1W209 222 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 Q6ZSN1 163 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 SEC11CQ9BY50 192 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 MRPS16Q9Y3D3 137 aaKnown RBP12.22□□□□□ -0.45
CTNS-203ENST00000399306 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
CTNS-203ENST00000399306 HIGD1CA8MV81 97 aa12.21□□□□□ -0.45
CTNS-203ENST00000399306 LINC00694P0DN24 101 aa12.21□□□□□ -0.45
CTNS-203ENST00000399306 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.45
CTNS-203ENST00000399306 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
CTNS-203ENST00000399306 MSRB1Q9NZV6 116 aa12.21□□□□□ -0.45
CTNS-203ENST00000399306 NAT8BQ9UHF3 227 aa12.21□□□□□ -0.45
CTNS-203ENST00000399306 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 SMIM27A0A1W2PRY6 76 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 TWIST1Q15672 202 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
CTNS-203ENST00000399306 F8W036 122 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 MT-ND4LP03901 98 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 ZNF56Q15929 161 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 ZNRF2Q8NHG8 242 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 FRZBQ92765 325 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
CTNS-203ENST00000399306 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
CTNS-203ENST00000399306 H7C1H1 209 aa12.18□□□□□ -0.46
CTNS-203ENST00000399306 EVI2AP22794 236 aa12.18□□□□□ -0.46
CTNS-203ENST00000399306 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
CTNS-203ENST00000399306 NUP35Q8NFH5 326 aa12.18□□□□□ -0.46
CTNS-203ENST00000399306 A0A1B0GW15 77 aa12.17□□□□□ -0.46
CTNS-203ENST00000399306 ADCYAP1P18509 176 aa12.17□□□□□ -0.46
CTNS-203ENST00000399306 SSTP61278 116 aa12.17□□□□□ -0.46
CTNS-203ENST00000399306 RPL36AP83881 106 aaKnown RBP12.17□□□□□ -0.46
CTNS-203ENST00000399306 RIGQ13278 110 aa12.17□□□□□ -0.46
CTNS-203ENST00000399306 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
CTNS-203ENST00000399306 RPL36ALQ969Q0 106 aaKnown RBP12.17□□□□□ -0.46
CTNS-203ENST00000399306 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
CTNS-203ENST00000399306 F5H697 171 aa12.16□□□□□ -0.46
CTNS-203ENST00000399306 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
CTNS-203ENST00000399306 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
CTNS-203ENST00000399306 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
CTNS-203ENST00000399306 CARHSP1Q9Y2V2 147 aaKnown RBP12.15□□□□□ -0.46
CTNS-203ENST00000399306 A0A087WWC5 75 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 K7EP13 123 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 M0QY20 66 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 UBE2D3P61077 147 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 UBE2D2P62837 147 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 GAGE1Q13065 139 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 GAGE4Q13068 117 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 GAGE5Q13069 117 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
CTNS-203ENST00000399306 S100A8P05109 93 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms