RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 DOCK10Q96BY6 2186 aa6.65□□□□□ -1.35
CTNND1-205ENST00000399050 APRG1Q8IVJ8 170 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 K7ENP7 123 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 ELANEP08246 267 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 ZNF80P51504 273 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-205ENST00000399050 AJUBAQ96IF1 538 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 OPRPNQ99935 248 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-205ENST00000399050 AKAP6Q13023 2319 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 MRPL55Q7Z7F7 128 aaKnown RBP6.64□□□□□ -1.35
CTNND1-205ENST00000399050 Q8N9W7 124 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 WFDC9Q8NEX5 89 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV1-58A0A0C4DH39 117 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 SEC61GP60059 68 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 MBD6Q96DN6 1003 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 ADAMTS9Q9P2N4 1935 aa6.64□□□□□ -1.35
CTNND1-205ENST00000399050 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
CTNND1-205ENST00000399050 DAZ4Q86SG3 579 aaKnown RBP6.63□□□□□ -1.35
CTNND1-205ENST00000399050 TM2D2Q9BX73 214 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 DAZ3Q9NR90 486 aaKnown RBP6.63□□□□□ -1.35
CTNND1-205ENST00000399050 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 DEFB1P60022 68 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 POLEQ07864 2286 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 TEX49A0A1B0GTD5 131 aa6.63□□□□□ -1.35
CTNND1-205ENST00000399050 EIF4EBP1Q13541 118 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-205ENST00000399050 LECT2O14960 151 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 DEFB136Q30KP8 78 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 HIST2H2BCQ6DN03 193 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 A0A0J9YY99 117 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 NCR3O14931 201 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 ATP5G1P05496 136 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV3-30-3P0DP02 117 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 MIAQ16674 131 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 LINC00643Q86TS7 51 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 J3QLI3 93 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV4-59P01825 116 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 GRNP28799 593 aaKnown RBP6.62□□□□□ -1.35
CTNND1-205ENST00000399050 C5orf56Q8N8D9 126 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 VSIG2Q96IQ7 327 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 Q9HAA7 133 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 DKK4Q9UBT3 224 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 ARFGEF3Q5TH69 2177 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 SLURP1P55000 103 aa6.62□□□□□ -1.35
CTNND1-205ENST00000399050 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 APOC4P55056 127 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 PLA2G2CQ5R387 149 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 C1orf229Q6ZS94 237 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-205ENST00000399050 RNF152Q8N8N0 203 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 IGLV1-47P01700 117 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 IGLC6P0CF74 106 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 C2orf91Q6ZV80 131 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 MDFICQ9P1T7 246 aa6.61□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV4-28A0A0C4DH34 117 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 Q96MF0 132 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 C2orf16Q68DN1 1984 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 PROP1O75360 226 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 U3KQK5 164 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 APC2O95996 2303 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV4-38-2P0DP08 117 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 C20orf203Q8NBC4 194 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 TRBV7-3A0A075B6L6 115 aa6.6□□□□□ -1.35
CTNND1-205ENST00000399050 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
CTNND1-205ENST00000399050 CGB7P0DN87 165 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 IGFL2Q6UWQ7 119 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 Q8N7P7 452 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 COX7A2LO14548 114 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-205ENST00000399050 BLCAPP62952 87 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 IGLV10-54A0A075B6I4 117 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 VPREB3Q9UKI3 123 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 GYPEP15421 78 aa6.59□□□□□ -1.35
CTNND1-205ENST00000399050 H3BQ85 93 aa6.59□□□□□ -1.36
CTNND1-205ENST00000399050 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.36
CTNND1-205ENST00000399050 CRIP1P50238 77 aa6.59□□□□□ -1.36
CTNND1-205ENST00000399050 SP5Q6BEB4 398 aaPredicted RBP6.59□□□□□ -1.36
CTNND1-205ENST00000399050 UQCRQO14949 82 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 PCNX3Q9H6A9 2034 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 NCOA6Q14686 2063 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-205ENST00000399050 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 TMEM256-PLSCR3K7ERE1 68 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 NREPQ16612 68 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 DYSFO75923 2080 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 PKDREJQ9NTG1 2253 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 TRAV23DV6A0A075B6W5 121 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 RNF185Q96GF1 192 aa6.58□□□□□ -1.36
CTNND1-205ENST00000399050 KIAA1549Q9HCM3 1950 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms