RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ETDBQ3ZM63 59 aa14.61□□□□□ -0.07
COL13A1-205ENST00000398978 PSMG4Q5JS54 123 aa14.61□□□□□ -0.07
COL13A1-205ENST00000398978 FOXI2Q6ZQN5 318 aa14.61□□□□□ -0.07
COL13A1-205ENST00000398978 MXRA5Q9NR99 2828 aa14.61□□□□□ -0.07
COL13A1-205ENST00000398978 PIEZO1Q92508 2521 aa14.61□□□□□ -0.07
COL13A1-205ENST00000398978 MDFICQ9P1T7 246 aa14.6□□□□□ -0.07
COL13A1-205ENST00000398978 KIF25-AS1Q9Y6Z4 181 aa14.6□□□□□ -0.07
COL13A1-205ENST00000398978 TLN2Q9Y4G6 2542 aa14.59□□□□□ -0.07
COL13A1-205ENST00000398978 DOPEY1Q5JWR5 2465 aa14.59□□□□□ -0.07
COL13A1-205ENST00000398978 IGSF10Q6WRI0 2623 aa14.58□□□□□ -0.07
COL13A1-205ENST00000398978 TMEM238C9JI98 176 aa14.58□□□□□ -0.07
COL13A1-205ENST00000398978 SRSF9Q13242 221 aaKnown RBP eCLIP14.58□□□□□ -0.07
COL13A1-205ENST00000398978 MYO9AB2RTY4 2548 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 NOTCH3Q9UM47 2321 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 ANKRD17O75179 2603 aaKnown RBP14.58□□□□□ -0.08
COL13A1-205ENST00000398978 IGHV4-59P01825 116 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 HTN1P15515 57 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 ZFP2Q6ZN57 461 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 PGPEP1Q9NXJ5 209 aa14.58□□□□□ -0.08
COL13A1-205ENST00000398978 DCANP1Q8TF63 244 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 APOMO95445 188 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 INSL3P51460 131 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 RRN3P1Q2M238 152 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 SDHAF1A6NFY7 115 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 IGLV1-40P01703 118 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 SPINK13Q1W4C9 94 aa14.57□□□□□ -0.08
COL13A1-205ENST00000398978 MORN3Q6PF18 240 aaPredicted RBP14.57□□□□□ -0.08
COL13A1-205ENST00000398978 KLLNB2CW77 178 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 CIDEAO60543 219 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 MSMBP08118 114 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 TMEM170BQ5T4T1 132 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 GTSF1LQ9H1H1 148 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 IGLV4-69A0A075B6H9 119 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 ATP6V0BQ99437 205 aa14.56□□□□□ -0.08
COL13A1-205ENST00000398978 TMEM238LA0A1B0GVL6 79 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 LINC01549A6NIU2 74 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 PRM2P04554 102 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 TAL2Q16559 108 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 MRPL16Q9NX20 251 aaKnown RBP14.55□□□□□ -0.08
COL13A1-205ENST00000398978 ABCA12Q86UK0 2595 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 IGHV3-64A0A075B6Q5 118 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
COL13A1-205ENST00000398978 TGFAP01135 160 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 TSPEAR-AS2P59090 65 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 ZNF56Q15929 161 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 HIST2H2BDQ6DRA6 164 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 APRG1Q8IVJ8 170 aa14.55□□□□□ -0.08
COL13A1-205ENST00000398978 SPANXB1Q9NS25 103 aaPredicted RBP14.54□□□□□ -0.08
COL13A1-205ENST00000398978 LOC107984156A0A0G2JMH3 177 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 POLR2KP53803 58 aaKnown RBP14.53□□□□□ -0.08
COL13A1-205ENST00000398978 ARL17AQ8IVW1 177 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 TSSC4Q9Y5U2 329 aaPredicted RBP14.53□□□□□ -0.08
COL13A1-205ENST00000398978 LRRK2Q5S007 2527 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 NACAE9PAV3 2078 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 IGHV3-73A0A0B4J1V6 119 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 IGIPA6NJ69 53 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 Q8N1Y9 231 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 PTPN13Q12923 2485 aa14.53□□□□□ -0.08
COL13A1-205ENST00000398978 SYNJ2BPP57105 145 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 DEFB112Q30KQ8 113 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 ZNRF2Q8NHG8 242 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 COX6B1P14854 86 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 ID1P41134 155 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 GAGE13Q4V321 117 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 KIR2DL4Q99706 377 aa14.52□□□□□ -0.08
COL13A1-205ENST00000398978 MED14OSP0DP75 135 aa14.52□□□□□ -0.09
COL13A1-205ENST00000398978 FBN2P35556 2912 aa14.52□□□□□ -0.09
COL13A1-205ENST00000398978 H3BUA1 57 aa14.51□□□□□ -0.09
COL13A1-205ENST00000398978 CFHR3Q02985 330 aa14.51□□□□□ -0.09
COL13A1-205ENST00000398978 PRORYQ9H606 182 aa14.51□□□□□ -0.09
COL13A1-205ENST00000398978 SPAG8Q99932 426 aaPredicted RBP14.5□□□□□ -0.09
COL13A1-205ENST00000398978 NXPH4O95158 308 aa14.5□□□□□ -0.09
COL13A1-205ENST00000398978 SMAGPQ0VAQ4 97 aa14.5□□□□□ -0.09
COL13A1-205ENST00000398978 PMVKQ15126 192 aa14.5□□□□□ -0.09
COL13A1-205ENST00000398978 WNK1Q9H4A3 2382 aa14.5□□□□□ -0.09
COL13A1-205ENST00000398978 VCYO14598 125 aa14.5□□□□□ -0.09
COL13A1-205ENST00000398978 IGHV3-16A0A0C4DH30 117 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 SETD2Q9BYW2 2564 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-205ENST00000398978 IGHV4OR15-8A0A075B7B6 117 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 A0A087WW49 117 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 A0A1B0GWB2 263 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 F8W1H4 67 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 PSMB2P49721 201 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 ZNF418Q8TF45 676 aaPredicted RBP14.49□□□□□ -0.09
COL13A1-205ENST00000398978 TEX15Q9BXT5 2789 aa14.49□□□□□ -0.09
COL13A1-205ENST00000398978 SONP18583 2426 aaKnown RBP14.48□□□□□ -0.09
COL13A1-205ENST00000398978 PSMB8P28062 276 aa14.48□□□□□ -0.09
COL13A1-205ENST00000398978 P0DMU3 169 aa14.48□□□□□ -0.09
COL13A1-205ENST00000398978 FAM231AP0DMU4 169 aa14.48□□□□□ -0.09
COL13A1-205ENST00000398978 FAM231CP0DMU5 169 aa14.48□□□□□ -0.09
COL13A1-205ENST00000398978 PRO0461Q9UI25 63 aa14.48□□□□□ -0.09
COL13A1-205ENST00000398978 PPP1R17O96001 155 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 PTH2Q96A98 100 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 ZNF580Q9UK33 172 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 TSPAN13O95857 204 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 AZU1P20160 251 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 PROK1P58294 105 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 POM121L12Q8N7R1 296 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 A0A0J9YX75 114 aa14.47□□□□□ -0.09
COL13A1-205ENST00000398978 A0A0J9YY99 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms