RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
CTDSP2-201ENST00000398073 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
CTDSP2-201ENST00000398073 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.4
CTDSP2-201ENST00000398073 CACNA1AO00555 2505 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 ODF3BA8MYP8 253 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 Q8NA96 180 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 ADORA2A-AS1P86434 159 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 CSPG4Q6UVK1 2322 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 RPL39P62891 51 aaKnown RBP12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 LAMTOR3Q9UHA4 124 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 K7EMT4 169 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 FSTL3O95633 263 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
CTDSP2-201ENST00000398073 C11orf86A6NJI1 115 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 CENPFP49454 3210 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 CRIP1P50238 77 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 TRAV13-2A0A0B4J235 113 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
CTDSP2-201ENST00000398073 CPAMD8Q8IZJ3 1885 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 WNK1Q9H4A3 2382 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 PFN2P35080 140 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 SOCS3O14543 225 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 GAGE7O76087 117 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 GAGE12FP0CL80 117 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 GAGE12GP0CL81 117 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 GAGE12IP0CL82 117 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 MUSTN1Q8IVN3 82 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
CTDSP2-201ENST00000398073 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 CFHR3Q02985 330 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 IGHG4P01861 327 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 C9orf153Q5TBE3 101 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
CTDSP2-201ENST00000398073 FOXI1Q12951 378 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 Q8N1Y9 231 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 Q9H8V8 135 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 IGHG2P01859 326 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 DEFB1P60022 68 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 U3KQE9 123 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 U3KQK5 164 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 SP5Q6BEB4 398 aaPredicted RBP12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 UNQ9165/PRO28630Q6UXU0 137 aa12.53□□□□□ -0.4
CTDSP2-201ENST00000398073 GAGE6Q13070 117 aa12.52□□□□□ -0.4
CTDSP2-201ENST00000398073 PIFOQ8TCI5 191 aa12.52□□□□□ -0.4
CTDSP2-201ENST00000398073 RNF152Q8N8N0 203 aa12.52□□□□□ -0.41
CTDSP2-201ENST00000398073 TM2D2Q9BX73 214 aa12.52□□□□□ -0.41
CTDSP2-201ENST00000398073 LY6LH3BQJ8 138 aa12.52□□□□□ -0.41
CTDSP2-201ENST00000398073 GPHB5Q86YW7 130 aa12.52□□□□□ -0.41
CTDSP2-201ENST00000398073 TANC2Q9HCD6 1990 aa12.51□□□□□ -0.41
CTDSP2-201ENST00000398073 LINC01620Q4KN68 170 aa12.51□□□□□ -0.41
CTDSP2-201ENST00000398073 COL5A1P20908 1838 aaPredicted RBP12.5□□□□□ -0.41
CTDSP2-201ENST00000398073 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
CTDSP2-201ENST00000398073 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
CTDSP2-201ENST00000398073 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
CTDSP2-201ENST00000398073 IGHV4-30-2A0A087WSY4 118 aa12.5□□□□□ -0.41
CTDSP2-201ENST00000398073 NACAE9PAV3 2078 aa12.49□□□□□ -0.41
CTDSP2-201ENST00000398073 HERV-K104P63124 156 aa12.49□□□□□ -0.41
CTDSP2-201ENST00000398073 Q8N976 141 aa12.49□□□□□ -0.41
CTDSP2-201ENST00000398073 RBX1P62877 108 aa12.49□□□□□ -0.41
CTDSP2-201ENST00000398073 EBI3Q14213 229 aa12.49□□□□□ -0.41
CTDSP2-201ENST00000398073 C20orf203Q8NBC4 194 aa12.48□□□□□ -0.41
CTDSP2-201ENST00000398073 ICOSQ9Y6W8 199 aa12.48□□□□□ -0.41
CTDSP2-201ENST00000398073 TRBV12-3P01733 135 aa12.48□□□□□ -0.41
CTDSP2-201ENST00000398073 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
CTDSP2-201ENST00000398073 SPAG8Q99932 426 aaPredicted RBP12.48□□□□□ -0.41
CTDSP2-201ENST00000398073 DSCAML1Q8TD84 2053 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 ATRXP46100 2492 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 PIEZO2Q9H5I5 2752 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 IGKV2D-26A0A0A0MRZ7 120 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 C2orf91Q6ZV80 131 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 Q96MF0 132 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 ACYP1P07311 99 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 DEFB136Q30KP8 78 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 NDUFA11Q86Y39 141 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 ZFAND3Q9H8U3 227 aa12.47□□□□□ -0.41
CTDSP2-201ENST00000398073 TLN1Q9Y490 2541 aaKnown RBP12.46□□□□□ -0.41
CTDSP2-201ENST00000398073 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
CTDSP2-201ENST00000398073 A0A0J9YX75 114 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 TMEM89A2RUT3 159 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 SLURP1P55000 103 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 LMO4P61968 165 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 C2CD3Q4AC94 2353 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 BAALC-AS2P0C853 105 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 NEXN-AS1Q8NBZ9 246 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 NXPH4O95158 308 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
CTDSP2-201ENST00000398073 CRYBA4P53673 196 aa12.44□□□□□ -0.42
CTDSP2-201ENST00000398073 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
CTDSP2-201ENST00000398073 APRG1Q8IVJ8 170 aa12.43□□□□□ -0.42
CTDSP2-201ENST00000398073 UBL5Q9BZL1 73 aa12.43□□□□□ -0.42
CTDSP2-201ENST00000398073 IGHV4OR15-8A0A075B7B6 117 aa12.43□□□□□ -0.42
CTDSP2-201ENST00000398073 A0A087WW49 117 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms