RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 M0R036 132 aa10.89□□□□□ -0.67
CUX2-202ENST00000397643 P01737 135 aa10.89□□□□□ -0.67
CUX2-202ENST00000397643 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
CUX2-202ENST00000397643 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
CUX2-202ENST00000397643 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 C19orf71A6NCJ1 209 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 KRBOX1C9JBD0 128 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 PAX4O43316 350 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 GNRH2O43555 120 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 SPINK4O60575 86 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 RPL23P62829 140 aaKnown RBP10.88□□□□□ -0.67
CUX2-202ENST00000397643 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 ADIRFQ15847 76 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 IBA57Q5T440 356 aaKnown RBP10.88□□□□□ -0.67
CUX2-202ENST00000397643 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
CUX2-202ENST00000397643 HMCN2Q8NDA2 5059 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 TYMSP04818 313 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 OR2D3Q8NGH3 330 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 NUDT11Q96G61 164 aa10.87□□□□□ -0.67
CUX2-202ENST00000397643 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 J3QL48 77 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 S100A4P26447 101 aaKnown RBP10.86□□□□□ -0.67
CUX2-202ENST00000397643 ASIPP42127 132 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 RPS20P60866 119 aaKnown RBP10.86□□□□□ -0.67
CUX2-202ENST00000397643 PNRC1Q12796 327 aaPredicted RBP10.86□□□□□ -0.67
CUX2-202ENST00000397643 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 SEC11CQ9BY50 192 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 RNASE7Q9H1E1 156 aaKnown RBP10.86□□□□□ -0.67
CUX2-202ENST00000397643 MSRB1Q9NZV6 116 aa10.86□□□□□ -0.67
CUX2-202ENST00000397643 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 GATCO43716 136 aaKnown RBP10.85□□□□□ -0.67
CUX2-202ENST00000397643 IGHV3-53P01767 116 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 CXCL1P09341 107 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 CRYBA4P53673 196 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 TCL1AP56279 114 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 WFDC10BQ8IUB3 73 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 C15orf54Q8N8G6 183 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 TMEM70Q9BUB7 260 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
CUX2-202ENST00000397643 OSTCQ9NRP0 149 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
CUX2-202ENST00000397643 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
CUX2-202ENST00000397643 RPL19P84098 196 aaKnown RBP10.84□□□□□ -0.67
CUX2-202ENST00000397643 DNLZQ5SXM8 178 aa10.84□□□□□ -0.67
CUX2-202ENST00000397643 SLC7A5P1Q8MH63 180 aa10.84□□□□□ -0.67
CUX2-202ENST00000397643 SFRP2Q96HF1 295 aa10.84□□□□□ -0.67
CUX2-202ENST00000397643 SPXQ9BT56 116 aa10.84□□□□□ -0.67
CUX2-202ENST00000397643 LRP1Q07954 4544 aaKnown RBP10.84□□□□□ -0.67
CUX2-202ENST00000397643 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
CUX2-202ENST00000397643 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
CUX2-202ENST00000397643 FHL2Q14192 279 aa10.83□□□□□ -0.68
CUX2-202ENST00000397643 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
CUX2-202ENST00000397643 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
CUX2-202ENST00000397643 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
CUX2-202ENST00000397643 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 K7EP13 123 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 CT83Q5H943 113 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 C10orf91Q5T1B1 145 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
CUX2-202ENST00000397643 IGLV5-52A0A0A0MRZ9 124 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 A8MWL6 223 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
CUX2-202ENST00000397643 H3BVH4 76 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 RNASE3P12724 160 aaKnown RBP10.81□□□□□ -0.68
CUX2-202ENST00000397643 C9orf85Q96MD7 179 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 FAM30AQ9NZY2 134 aa10.81□□□□□ -0.68
CUX2-202ENST00000397643 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
CUX2-202ENST00000397643 K7EQD1 137 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 M0R2P5 195 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 MT-ND4LP03901 98 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 GZMBP10144 247 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 SLAQ13239 276 aa10.8□□□□□ -0.68
CUX2-202ENST00000397643 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
CUX2-202ENST00000397643 EVI2AP22794 236 aa10.79□□□□□ -0.68
CUX2-202ENST00000397643 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
CUX2-202ENST00000397643 PTH2Q96A98 100 aa10.79□□□□□ -0.68
CUX2-202ENST00000397643 PHLDA3Q9Y5J5 127 aa10.79□□□□□ -0.68
CUX2-202ENST00000397643 V9GYV3 84 aa10.79□□□□□ -0.68
CUX2-202ENST00000397643 F2Z2F3 143 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 CRYGDP07320 174 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 ZNF876PQ49A33 203 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 SYT8Q8NBV8 401 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 TPPP3Q9BW30 176 aa10.78□□□□□ -0.68
CUX2-202ENST00000397643 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
CUX2-202ENST00000397643 FAT3Q8TDW7 4589 aa10.77□□□□□ -0.68
CUX2-202ENST00000397643 FAM231BA6NCW3 169 aa10.77□□□□□ -0.69
CUX2-202ENST00000397643 SNAI2O43623 268 aa10.77□□□□□ -0.69
CUX2-202ENST00000397643 APOC3P02656 99 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms