RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 IGHV3-73A0A0B4J1V6 119 aa16.65■□□□□ 0.26
TSPAN4-203ENST00000397397 FAM74A4Q5TZK3 123 aa16.65■□□□□ 0.26
TSPAN4-203ENST00000397397 C14orf178Q8N769 122 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-203ENST00000397397 DNAH7Q8WXX0 4024 aa16.65■□□□□ 0.26
TSPAN4-203ENST00000397397 TRGV4A0A0C4DH28 118 aa16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 CRYGDP07320 174 aa16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 SMIM17P0DL12 118 aa16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 HOXA5P20719 270 aa16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 S100PP25815 95 aa16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 MRPL54Q6P161 138 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-203ENST00000397397 CIDEAO60543 219 aa16.63■□□□□ 0.25
TSPAN4-203ENST00000397397 URGCP-MRPS24S4R325 110 aa16.63■□□□□ 0.25
TSPAN4-203ENST00000397397 RHODO00212 210 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 ATP6V1G1O75348 118 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 EVI2AP22794 236 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 FHL2Q14192 279 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 UFSP1Q6NVU6 142 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 ZFP2Q6ZN57 461 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 SMIM15Q7Z3B0 74 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 BTF3L4Q96K17 158 aa16.62■□□□□ 0.25
TSPAN4-203ENST00000397397 A0A1B0GW15 77 aa16.61■□□□□ 0.25
TSPAN4-203ENST00000397397 MUC7Q8TAX7 377 aa16.61■□□□□ 0.25
TSPAN4-203ENST00000397397 DPH3P1Q9H4G8 78 aa16.61■□□□□ 0.25
TSPAN4-203ENST00000397397 KIF25-AS1Q9Y6Z4 181 aa16.61■□□□□ 0.25
TSPAN4-203ENST00000397397 CAMPP49913 170 aa16.6■□□□□ 0.25
TSPAN4-203ENST00000397397 ATP5L2Q7Z4Y8 100 aa16.6■□□□□ 0.25
TSPAN4-203ENST00000397397 TRAV9-1A0A075B6T8 112 aa16.59■□□□□ 0.25
TSPAN4-203ENST00000397397 A0A1B0GXF2 115 aa16.59■□□□□ 0.25
TSPAN4-203ENST00000397397 MGPP08493 103 aa16.59■□□□□ 0.25
TSPAN4-203ENST00000397397 HBBP68871 147 aa16.59■□□□□ 0.25
TSPAN4-203ENST00000397397 HHLA3Q9XRX5 114 aa16.59■□□□□ 0.25
TSPAN4-203ENST00000397397 GATA1P15976 413 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-203ENST00000397397 S100A1P23297 94 aa16.58■□□□□ 0.24
TSPAN4-203ENST00000397397 SLAQ13239 276 aa16.58■□□□□ 0.24
TSPAN4-203ENST00000397397 ZNF56Q15929 161 aa16.58■□□□□ 0.24
TSPAN4-203ENST00000397397 F5H697 171 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 S100A8P05109 93 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 LINC00315P59091 139 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 ZFAND6Q6FIF0 208 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 CEMP1Q6PRD7 247 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 TMEM191AQ9H0A3 160 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 PRO0255Q9UI72 69 aa16.57■□□□□ 0.24
TSPAN4-203ENST00000397397 TRAV26-1A0A087WT03 109 aa16.56■□□□□ 0.24
TSPAN4-203ENST00000397397 A0A0J9YY99 117 aa16.56■□□□□ 0.24
TSPAN4-203ENST00000397397 NUPR2A6NF83 97 aa16.56■□□□□ 0.24
TSPAN4-203ENST00000397397 Q6ZSN1 163 aa16.56■□□□□ 0.24
TSPAN4-203ENST00000397397 CRYBA4P53673 196 aa16.55■□□□□ 0.24
TSPAN4-203ENST00000397397 RAB4BP61018 213 aa16.55■□□□□ 0.24
TSPAN4-203ENST00000397397 TMEM88Q6PEY1 159 aa16.55■□□□□ 0.24
TSPAN4-203ENST00000397397 SMCO4Q9NRQ5 59 aa16.55■□□□□ 0.24
TSPAN4-203ENST00000397397 PAX4O43316 350 aa16.54■□□□□ 0.24
TSPAN4-203ENST00000397397 CBLN2Q8IUK8 224 aa16.54■□□□□ 0.24
TSPAN4-203ENST00000397397 SLC25A29Q8N8R3 303 aa16.54■□□□□ 0.24
TSPAN4-203ENST00000397397 IGLL5B9A064 214 aa16.53■□□□□ 0.24
TSPAN4-203ENST00000397397 KLK5Q9Y337 293 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-203ENST00000397397 TRBV6-4A0A1B0GX49 114 aa16.53■□□□□ 0.24
TSPAN4-203ENST00000397397 ELOBQ15370 118 aa16.53■□□□□ 0.24
TSPAN4-203ENST00000397397 VSIG2Q96IQ7 327 aa16.53■□□□□ 0.24
TSPAN4-203ENST00000397397 TGIF2-C20orf24A0A0A6YYL0 155 aa16.52■□□□□ 0.23
TSPAN4-203ENST00000397397 K7EQD1 137 aa16.52■□□□□ 0.23
TSPAN4-203ENST00000397397 AMN1Q8IY45 258 aa16.52■□□□□ 0.23
TSPAN4-203ENST00000397397 GATD1Q8NB37 220 aa16.52■□□□□ 0.23
TSPAN4-203ENST00000397397 FAM210BQ96KR6 192 aa16.52■□□□□ 0.23
TSPAN4-203ENST00000397397 RHOHQ15669 191 aa16.51■□□□□ 0.23
TSPAN4-203ENST00000397397 SUMO4Q6EEV6 95 aa16.51■□□□□ 0.23
TSPAN4-203ENST00000397397 RASL11AQ6T310 242 aa16.51■□□□□ 0.23
TSPAN4-203ENST00000397397 PRADC1Q9BSG0 188 aa16.51■□□□□ 0.23
TSPAN4-203ENST00000397397 KMT2CQ8NEZ4 4911 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-203ENST00000397397 DYNC2H1Q8NCM8 4307 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-203ENST00000397397 FAM104BQ5XKR9 115 aa16.5■□□□□ 0.23
TSPAN4-203ENST00000397397 RNF185Q96GF1 192 aa16.5■□□□□ 0.23
TSPAN4-203ENST00000397397 LOC100131303A0A0U1RQF7 123 aa16.49■□□□□ 0.23
TSPAN4-203ENST00000397397 RAB4AP20338 218 aa16.49■□□□□ 0.23
TSPAN4-203ENST00000397397 H3BNG1 76 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 C3orf84H3BNL1 204 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 SCO1O75880 301 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 P0DMU3 169 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 FAM231AP0DMU4 169 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 FAM231CP0DMU5 169 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 GYPEP15421 78 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 YPEL4Q96NS1 127 aa16.48■□□□□ 0.23
TSPAN4-203ENST00000397397 TRBV24-1A0A075B6N3 115 aa16.47■□□□□ 0.23
TSPAN4-203ENST00000397397 TRAV26-2A0A0B4J265 109 aa16.47■□□□□ 0.23
TSPAN4-203ENST00000397397 H7C1H1 209 aa16.47■□□□□ 0.23
TSPAN4-203ENST00000397397 NUDT3O95989 172 aa16.47■□□□□ 0.23
TSPAN4-203ENST00000397397 M0QY20 66 aa16.46■□□□□ 0.23
TSPAN4-203ENST00000397397 TMEM136Q6ZRR5 245 aa16.46■□□□□ 0.23
TSPAN4-203ENST00000397397 C15orf53Q8NAA6 179 aa16.46■□□□□ 0.23
TSPAN4-203ENST00000397397 Q9UF83 564 aa16.46■□□□□ 0.23
TSPAN4-203ENST00000397397 ICOSQ9Y6W8 199 aa16.46■□□□□ 0.23
TSPAN4-203ENST00000397397 COX19Q49B96 90 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 MRPL51Q4U2R6 128 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 STARD9Q9P2P6 4700 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 TRBV10-1A0A0K0K1A3 114 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 GAGE12JA6NER3 117 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 GAGE1Q13065 139 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 GAGE4Q13068 117 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 GAGE5Q13069 117 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 GAGE13Q4V321 117 aa16.45■□□□□ 0.22
TSPAN4-203ENST00000397397 CASC10Q5T4H9 136 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms