RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 TMEM262E9PQX1 116 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 CFC1P0CG37 223 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 C9orf139Q6ZV77 190 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 LRBAP50851 2863 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 TRBV7-1A0A0A6YYK4 115 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 COX6B1P14854 86 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
CAPN3-206ENST00000397163 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 LINC00477Q96M19 166 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 ZFP36P26651 326 aaKnown RBP6.93□□□□□ -1.3
CAPN3-206ENST00000397163 RNASE4P34096 147 aaKnown RBP6.93□□□□□ -1.3
CAPN3-206ENST00000397163 Q1RN00 199 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 A0A0J9YY99 117 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 GNRH2O43555 120 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
CAPN3-206ENST00000397163 Q8N1Y9 231 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 TP53TG1Q9Y2A0 90 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 U3KQE9 123 aa6.93□□□□□ -1.3
CAPN3-206ENST00000397163 IGKV3-7A0A075B6H7 116 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 PPP1R17O96001 155 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 CRYGDP07320 174 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 VCX2Q9H322 139 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 LINC00527Q9UJ94 153 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 TLN1Q9Y490 2541 aaKnown RBP6.92□□□□□ -1.3
CAPN3-206ENST00000397163 EPG5Q9HCE0 2579 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 DCHS2Q6V1P9 2916 aa6.92□□□□□ -1.3
CAPN3-206ENST00000397163 SPTBN1Q01082 2364 aaKnown RBP6.91□□□□□ -1.3
CAPN3-206ENST00000397163 TRAV8-4A0A0B4J246 113 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 TSPEAR-AS2P59090 65 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 PAPPA-AS1Q5QFB9 102 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 ITLN2Q8WWU7 325 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-206ENST00000397163 OVOL1O14753 267 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 SAA4P35542 130 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 PMVKQ15126 192 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 GPHB5Q86YW7 130 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 ASH1LQ9NR48 2969 aaKnown RBP6.91□□□□□ -1.3
CAPN3-206ENST00000397163 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 F6UB75 175 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 NBASA2RRP1 2371 aa6.91□□□□□ -1.3
CAPN3-206ENST00000397163 USP24Q9UPU5 2620 aa6.9□□□□□ -1.3
CAPN3-206ENST00000397163 F5H697 171 aa6.9□□□□□ -1.3
CAPN3-206ENST00000397163 TSHBP01222 138 aa6.9□□□□□ -1.3
CAPN3-206ENST00000397163 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
CAPN3-206ENST00000397163 ZNF56Q15929 161 aa6.9□□□□□ -1.3
CAPN3-206ENST00000397163 SIRPDQ9H106 197 aa6.9□□□□□ -1.3
CAPN3-206ENST00000397163 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.31
CAPN3-206ENST00000397163 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.31
CAPN3-206ENST00000397163 ZFHX3Q15911 3703 aa6.9□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 RNASE3P12724 160 aaKnown RBP6.89□□□□□ -1.31
CAPN3-206ENST00000397163 UBE2E1P51965 193 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 KLRB1Q12918 225 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 KLK9Q2XQG4 91 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 UNQ9165/PRO28630Q6UXU0 137 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 TMEM219Q86XT9 240 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 SBSPONQ8IVN8 264 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 KLK9Q9UKQ9 250 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 A4D1N5 150 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 CCL21O00585 134 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-206ENST00000397163 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
CAPN3-206ENST00000397163 ATRXP46100 2492 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 IGIPA6NJ69 53 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 MED14OSP0DP75 135 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 SLC25A29Q8N8R3 303 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 DUX3Q96PT4 197 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 JPT2Q9H910 190 aa6.89□□□□□ -1.31
CAPN3-206ENST00000397163 KLK5Q9Y337 293 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-206ENST00000397163 A0A087WWL8 130 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 VCYO14598 125 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 TRBV12-3P01733 135 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 J3QQQ9 107 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 LY6DQ14210 128 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 C11orf71Q6IPW1 123 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 TMEM141Q96I45 108 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 CDSNQ15517 529 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 SUMO4Q6EEV6 95 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 C5orf56Q8N8D9 126 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 ZNRF2Q8NHG8 242 aa6.88□□□□□ -1.31
CAPN3-206ENST00000397163 BSNQ9UPA5 3926 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 NPC2P61916 151 aa6.87□□□□□ -1.31
CAPN3-206ENST00000397163 FBXL19-AS1Q494R0 122 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms