RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SERF1AO75920 110 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 ORMDL3Q8N138 153 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 NRACQ8N912 160 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 AP1S3Q96PC3 154 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 M0R2P5 195 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 IGHV4-30-4P0DP06 118 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 SPXQ9BT56 116 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 PPBPP02775 128 aa9.15□□□□□ -0.94
TRIM39-204ENST00000396548 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
TRIM39-204ENST00000396548 SAMD10Q9BYL1 202 aa9.15□□□□□ -0.94
TRIM39-204ENST00000396548 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
TRIM39-204ENST00000396548 ZNF876PQ49A33 203 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 RASL10AQ92737 203 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 MRAP2Q96G30 205 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 PRELID3AQ96N28 172 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 NDUFAF3Q9BU61 184 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 X6R8D5 127 aa9.15□□□□□ -0.95
TRIM39-204ENST00000396548 NCR2O95944 276 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 NPYP01303 97 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 SMIM15Q7Z3B0 74 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 TMEM208Q9BTX3 173 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 TRAV26-2A0A0B4J265 109 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 GATA1P15976 413 aaPredicted RBP9.14□□□□□ -0.95
TRIM39-204ENST00000396548 CKS2P33552 79 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 DEFA6Q01524 100 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
TRIM39-204ENST00000396548 HIST1H2BLQ99880 126 aa9.14□□□□□ -0.95
TRIM39-204ENST00000396548 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 NIT1Q86X76 327 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 BAGE3Q86Y29 109 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 OVOL2Q9BRP0 275 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
TRIM39-204ENST00000396548 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
TRIM39-204ENST00000396548 A0A087WWL8 130 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 APOC4P55056 127 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 PDZD11Q5EBL8 140 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 KPRPQ5T749 579 aaPredicted RBP9.12□□□□□ -0.95
TRIM39-204ENST00000396548 EDA2RQ9HAV5 297 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 CFAP126Q5VTH2 177 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 PACRGQ96M98 296 aaPredicted RBP9.12□□□□□ -0.95
TRIM39-204ENST00000396548 RS1O15537 224 aa9.12□□□□□ -0.95
TRIM39-204ENST00000396548 LGALS9BQ3B8N2 356 aa9.11□□□□□ -0.95
TRIM39-204ENST00000396548 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
TRIM39-204ENST00000396548 MRPL16Q9NX20 251 aaKnown RBP9.11□□□□□ -0.95
TRIM39-204ENST00000396548 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
TRIM39-204ENST00000396548 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 CDPF1Q6NVV7 123 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 A8MWV9 139 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 LINC00614P0C842 121 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
TRIM39-204ENST00000396548 M0QY20 66 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
TRIM39-204ENST00000396548 RNF183Q96D59 192 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 RPL39LQ96EH5 51 aaKnown RBP9.09□□□□□ -0.95
TRIM39-204ENST00000396548 MGPP08493 103 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 SMIM17P0DL12 118 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 FABP4P15090 132 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 Q6ZTI0 123 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 Q6ZWC4 215 aa9.09□□□□□ -0.95
TRIM39-204ENST00000396548 Q6ZSN1 163 aa9.08□□□□□ -0.96
TRIM39-204ENST00000396548 NOP10Q9NPE3 64 aaKnown RBP9.08□□□□□ -0.96
TRIM39-204ENST00000396548 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
TRIM39-204ENST00000396548 ZFP2Q6ZN57 461 aa9.08□□□□□ -0.96
TRIM39-204ENST00000396548 C20orf78Q9BR46 151 aa9.08□□□□□ -0.96
TRIM39-204ENST00000396548 A0A096LNJ9 63 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 IGHV1-24A0A0C4DH33 117 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
TRIM39-204ENST00000396548 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 RNASEKQ6P5S7 137 aaKnown RBP9.07□□□□□ -0.96
TRIM39-204ENST00000396548 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 Q8N8P6 123 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 TMEM18Q96B42 140 aa9.07□□□□□ -0.96
TRIM39-204ENST00000396548 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 FAM19A2Q8N3H0 131 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 Q8NAQ8 132 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 C14orf144Q96I85 54 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 HUWE1Q7Z6Z7 4374 aaKnown RBP9.06□□□□□ -0.96
TRIM39-204ENST00000396548 S100A2P29034 98 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 TRAV4A0A0B4J268 109 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
TRIM39-204ENST00000396548 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 PRO1933Q9H354 126 aa9.06□□□□□ -0.96
TRIM39-204ENST00000396548 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
TRIM39-204ENST00000396548 PPP1R17O96001 155 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
TRIM39-204ENST00000396548 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
TRIM39-204ENST00000396548 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms