RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ID1P41134 155 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 TMEM95Q3KNT9 176 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 TIMM17AQ99595 171 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 CCL19Q99731 98 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
HOXA3-202ENST00000396352 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
HOXA3-202ENST00000396352 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 TMEM238LA0A1B0GVL6 79 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 A6NJY4 79 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 PAPPA-AS1Q5QFB9 102 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 MRPL16Q9NX20 251 aaKnown RBP11.69□□□□□ -0.54
HOXA3-202ENST00000396352 A0A0J9YY99 117 aa11.69□□□□□ -0.54
HOXA3-202ENST00000396352 TRBV6-5A0A0K0K1A5 114 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
HOXA3-202ENST00000396352 ZNRF2Q8NHG8 242 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 F5H697 171 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 TSPAN13O95857 204 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 MSMBP08118 114 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 NDUFS8O00217 210 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 AVPP01185 164 aa11.68□□□□□ -0.54
HOXA3-202ENST00000396352 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 PSMB8P28062 276 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 HERVK_113P61574 105 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 ZNF876PQ49A33 203 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 SAMD13Q5VXD3 122 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 MDFICQ9P1T7 246 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 INSL3P51460 131 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 GTSF1LQ9H1H1 148 aa11.67□□□□□ -0.54
HOXA3-202ENST00000396352 ZNF688P0C7X2 276 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 AZU1P20160 251 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 AMELXQ99217 191 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 PRORYQ9H606 182 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 TRAV12-2A0A075B6T6 113 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 J3QR89 54 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
HOXA3-202ENST00000396352 CFAP126Q5VTH2 177 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
HOXA3-202ENST00000396352 A0A0J9YX75 114 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 M0QY20 66 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 C10orf99Q6UWK7 81 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 UBE2D3P61077 147 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 UBE2D2P62837 147 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
HOXA3-202ENST00000396352 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 Q8N1Y9 231 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
HOXA3-202ENST00000396352 IGKV3-20P01619 116 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 IGHV3-30P01768 117 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 IGHV3-30-5P0DP03 117 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 ATP5J2P56134 94 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 ZNF256Q9Y2P7 627 aaPredicted RBP11.64□□□□□ -0.55
HOXA3-202ENST00000396352 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
HOXA3-202ENST00000396352 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
HOXA3-202ENST00000396352 SLC25A29Q8N8R3 303 aa11.63□□□□□ -0.55
HOXA3-202ENST00000396352 APOMO95445 188 aa11.63□□□□□ -0.55
HOXA3-202ENST00000396352 ZNF56Q15929 161 aa11.63□□□□□ -0.55
HOXA3-202ENST00000396352 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
HOXA3-202ENST00000396352 NFE4Q86UQ8 179 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 K7EQG2 157 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 P0DMU3 169 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 CFC1P0CG37 223 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 SCGB1A1P11684 91 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 SYT8Q8NBV8 401 aa11.62□□□□□ -0.55
HOXA3-202ENST00000396352 LOC107984156A0A0G2JMH3 177 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 J3QQQ9 107 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 ARL17AQ8IVW1 177 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 C1QTNF4Q9BXJ3 329 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 IGHV1OR15-1A0A075B7D0 117 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 PSMB2P49721 201 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
HOXA3-202ENST00000396352 RHOHQ15669 191 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
HOXA3-202ENST00000396352 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
HOXA3-202ENST00000396352 ATP6V0E2Q8NHE4 81 aa11.6□□□□□ -0.55
HOXA3-202ENST00000396352 CFAP46Q8IYW2 2715 aa11.6□□□□□ -0.55
HOXA3-202ENST00000396352 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■□□□□ 10.3
HOXA3-202ENST00000396352 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
HOXA3-202ENST00000396352 FOXI1Q12951 378 aa11.59□□□□□ -0.55
HOXA3-202ENST00000396352 B4DSR2 109 aa11.59□□□□□ -0.55
HOXA3-202ENST00000396352 DEFB112Q30KQ8 113 aa11.59□□□□□ -0.55
HOXA3-202ENST00000396352 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
HOXA3-202ENST00000396352 TCL1BO95988 128 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms