RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 JPT2Q9H910 190 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 CD7P09564 240 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 SMIM17P0DL12 118 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 SNRPD3P62318 126 aaKnown RBP13.39□□□□□ -0.27
SREBF1-204ENST00000395756 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 ZNF580Q9UK33 172 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 LENEPQ9Y5L5 61 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 DPF1Q92782 380 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 RNF183Q96D59 192 aa13.39□□□□□ -0.27
SREBF1-204ENST00000395756 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
SREBF1-204ENST00000395756 AKAP9Q99996 3911 aa13.38□□□□□ -0.27
SREBF1-204ENST00000395756 TRBV7-9A0A0J9YWB2 115 aa13.38□□□□□ -0.27
SREBF1-204ENST00000395756 SIVA1O15304 175 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 SMIM20Q8N5G0 67 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 IFI27L1Q96BM0 104 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
SREBF1-204ENST00000395756 ADAMTSL5Q6ZMM2 481 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 RPL39LQ96EH5 51 aaKnown RBP13.37□□□□□ -0.27
SREBF1-204ENST00000395756 PDZD2O15018 2839 aa13.37□□□□□ -0.27
SREBF1-204ENST00000395756 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
SREBF1-204ENST00000395756 A0A087WWL8 130 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 PRSS1P07477 247 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 KLHL30-AS1Q8NEE0 82 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 LINC01545Q5VT33 79 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 FAM19A4Q96LR4 140 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 DKK2Q9UBU2 259 aa13.36□□□□□ -0.27
SREBF1-204ENST00000395756 B5MCH6 92 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 TSPAN13O95857 204 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 PRM2P04554 102 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 CITED1Q99966 193 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 YAE1D1Q9NRH1 226 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
SREBF1-204ENST00000395756 J3QKU1 62 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 K7EQG2 157 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 PLA2G2AP14555 144 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 FAM74A4Q5TZK3 123 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 TMEM89A2RUT3 159 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 NRACQ8N912 160 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 SCRT2Q9NQ03 307 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 F5H697 171 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-204ENST00000395756 NXT2Q9NPJ8 142 aaKnown RBP13.34□□□□□ -0.27
SREBF1-204ENST00000395756 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
SREBF1-204ENST00000395756 A0A0J9YX75 114 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 H3BRM9 83 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 DEFB131AP59861 70 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 Q6ZSV7 163 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 DNAJC9-AS1A6NH13 148 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 ESM1Q9NQ30 184 aa13.33□□□□□ -0.28
SREBF1-204ENST00000395756 A0A1W2PPM0 123 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 KLLNB2CW77 178 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 SEC11AP67812 179 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 WFDC2Q14508 124 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 A6NDN8 102 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 MTURNQ8N3F0 131 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 OR5A1Q8NGJ0 315 aa13.32□□□□□ -0.28
SREBF1-204ENST00000395756 LINC01619G3V211 115 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 FABP2P12104 132 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 MYOZ3Q8TDC0 251 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 HIVEP2P31629 2446 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 MUC4Q99102 2169 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 FCER1GP30273 86 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 C2orf91Q6ZV80 131 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 Q8N8P6 123 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 MRPL16Q9NX20 251 aaKnown RBP13.31□□□□□ -0.28
SREBF1-204ENST00000395756 J3QR89 54 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 TMEM61Q8N0U2 210 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-204ENST00000395756 SMR3AQ99954 134 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 DPH3P1Q9H4G8 78 aa13.31□□□□□ -0.28
SREBF1-204ENST00000395756 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 ETDBQ3ZM63 59 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 FOXC2Q99958 501 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 INSL3P51460 131 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 APRG1Q8IVJ8 170 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 Q8N1Y9 231 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 RASL10AQ92737 203 aa13.3□□□□□ -0.28
SREBF1-204ENST00000395756 LGALS9O00182 355 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 NMUP48645 174 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 LAGE3Q14657 143 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 DYNLRB2Q8TF09 96 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 IGLV2-18A0A075B6J9 118 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 OR11H2Q8NH07 326 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 SPATA25Q9BR10 227 aa13.29□□□□□ -0.28
SREBF1-204ENST00000395756 SPINK8P0C7L1 97 aa13.28□□□□□ -0.28
SREBF1-204ENST00000395756 SUMO2P61956 95 aaKnown RBP13.27□□□□□ -0.28
SREBF1-204ENST00000395756 KMT2BQ9UMN6 2715 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-204ENST00000395756 SAMD5Q5TGI4 173 aa13.27□□□□□ -0.29
SREBF1-204ENST00000395756 TTTY13Q9BZ97 58 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 TMEM160Q9NX00 188 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 CD28P10747 220 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 LGALS9BQ3B8N2 356 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 LGALS9CQ6DKI2 356 aa13.26□□□□□ -0.29
SREBF1-204ENST00000395756 Q8N2B8 174 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms