RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TRAPPC1Q9Y5R8 145 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 C2orf70A6NJV1 201 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 LY6G6DO95868 133 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 CGB3P0DN86 165 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 CGB7P0DN87 165 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 RNASE2P10153 161 aaKnown RBP3.05□□□□□ -1.92
HERC4-204ENST00000395198 ELK1P19419 428 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 FAM223AQ8IWN6 122 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 DAND5Q8N907 189 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 NOTCH4Q99466 2003 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 EPG5Q9HCE0 2579 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 CAV3P56539 151 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 UBALD1Q8TB05 177 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 HIST1H4GQ99525 98 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 BPESC1Q9GZL8 116 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 COL4A2P08572 1712 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 CPAMD8Q8IZJ3 1885 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 LRRK2Q5S007 2527 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 IGKV1-6A0A0C4DH72 117 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 DNAJC9-AS1A6NH13 148 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 H7BZZ5 65 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 RPL30P62888 115 aaKnown RBP3.04□□□□□ -1.92
HERC4-204ENST00000395198 NRACQ8N912 160 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 COPS9Q8WXC6 57 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 TAS2R4Q9NYW5 299 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 WNK1Q9H4A3 2382 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 RANBP2P49792 3224 aaKnown RBP3.04□□□□□ -1.92
HERC4-204ENST00000395198 KIF26BQ2KJY2 2108 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 LAMA2P24043 3122 aaKnown RBP3.04□□□□□ -1.92
HERC4-204ENST00000395198 APCSP02743 223 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 SCGB1C2P0DMR2 95 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 GNB1P62873 340 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 LINC00114Q6XXX2 140 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 IMMP1LQ96LU5 166 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 NABP2Q9BQ15 211 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 PLA2G12AQ9BZM1 189 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 R4GMQ9 66 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 ZFHX4Q86UP3 3567 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 C19orf71A6NCJ1 209 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 CRIP3Q6Q6R5 217 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 TMEM252Q8N6L7 170 aa3.04□□□□□ -1.92
HERC4-204ENST00000395198 J3QKU1 62 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 ANKRD11Q6UB99 2663 aaPredicted RBP3.03□□□□□ -1.92
HERC4-204ENST00000395198 HEATR5BQ9P2D3 2071 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 IGHV4-38-2P0DP08 117 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 SNRPGP62308 76 aaKnown RBP3.03□□□□□ -1.92
HERC4-204ENST00000395198 RHOHQ15669 191 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 TWIST1Q15672 202 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 SCXQ7RTU7 201 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 MPLKIPQ8TAP9 179 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 CCL19Q99731 98 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 TLN2Q9Y4G6 2542 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 FLNBO75369 2602 aaKnown RBP3.03□□□□□ -1.92
HERC4-204ENST00000395198 IGLV5-52A0A0A0MRZ9 124 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 LEPROTO15243 131 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 IGKV3-11P04433 115 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 ICAM4Q14773 271 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 CLEC2BQ92478 149 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 PRO3102Q9H379 93 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 LY96Q9Y6Y9 160 aa3.03□□□□□ -1.92
HERC4-204ENST00000395198 C17orf51A8MQB3 221 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3-48P01763 117 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 IGHV3-13P01766 116 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 CHTF8P0CG12 524 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 CD28P10747 220 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 PLA2G5P39877 138 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 FXYD2P54710 66 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 CXCL6P80162 114 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 Q8IYB0 196 aa3.03□□□□□ -1.93
HERC4-204ENST00000395198 MKI67P46013 3256 aaKnown RBP3.03□□□□□ -1.93
HERC4-204ENST00000395198 EML5Q05BV3 1969 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 MUC22E2RYF6 1773 aaPredicted RBP3.02□□□□□ -1.93
HERC4-204ENST00000395198 MYO9AB2RTY4 2548 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 ZNF56Q15929 161 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 SDIM1Q6ZPB5 146 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 ZNF503-AS2A6NEH8 195 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 WISP3O95389 354 aaPredicted RBP3.02□□□□□ -1.93
HERC4-204ENST00000395198 KRTAP27-1Q3LI81 207 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 SLC25A22Q9H936 323 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 IGKV3D-11A0A0A0MRZ8 115 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 TMEM30CPA0ZSE6 113 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 PTHLHP12272 177 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 FAM104BQ5XKR9 115 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 PPP1R1CQ8WVI7 109 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 DOCK11Q5JSL3 2073 aa3.02□□□□□ -1.93
HERC4-204ENST00000395198 C11orf94C9JXX5 98 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 KRTAP4-16G5E9R7 235 aaPredicted RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 IGHV4-39P01824 125 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 BGLAPP02818 100 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 IGLV3-21P80748 117 aaPredicted RBP3.01□□□□□ -1.93
HERC4-204ENST00000395198 FHL1Q13642 323 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 Q1T7F1 81 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 Q6ZSN1 163 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 BAGE2Q86Y30 109 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 Q8N7P7 452 aa3.01□□□□□ -1.93
HERC4-204ENST00000395198 ARL2-SNX15V9GYD0 113 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms