RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DUSP14O95147 198 aaKnown RBP13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 LINC00315P59091 139 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 TEX15Q9BXT5 2789 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 PPP1R17O96001 155 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 CRYGDP07320 174 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 MORN3Q6PF18 240 aaPredicted RBP13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 LCNL1Q6ZST4 164 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 MAPK1IP1LQ8NDC0 245 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
PCDHA1-202ENST00000394633 TRBV7-9A0A0J9YWB2 115 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 H3BUA1 57 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 BRI3O95415 125 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 IGHG2P01859 326 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 PF4V1P10720 104 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 TLN2Q9Y4G6 2542 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 ZNF815PA8K554 130 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 TSHBP01222 138 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 PLEKHB2Q96CS7 222 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 PRO0461Q9UI25 63 aa13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 PRRC2AP48634 2157 aaKnown RBP13.75□□□□□ -0.21
PCDHA1-202ENST00000394633 A0A096LNT2 108 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 IGHV4-38-2P0DP08 117 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 SRD5A1P18405 259 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 Q6ZS46 218 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 SH2D6Q7Z4S9 175 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 MTURNQ8N3F0 131 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 HOXA3O43365 443 aaPredicted RBP13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 EDN2P20800 178 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 DEFB113Q30KQ7 82 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 JPT2Q9H910 190 aa13.74□□□□□ -0.21
PCDHA1-202ENST00000394633 IGHV4OR15-8A0A075B7B6 117 aa13.73□□□□□ -0.21
PCDHA1-202ENST00000394633 A0A087WW49 117 aa13.73□□□□□ -0.21
PCDHA1-202ENST00000394633 KLLNB2CW77 178 aa13.73□□□□□ -0.21
PCDHA1-202ENST00000394633 SCGB2A2Q13296 93 aa13.73□□□□□ -0.21
PCDHA1-202ENST00000394633 CR1P17927 2039 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 IGLV4-69A0A075B6H9 119 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 A6NDX4 124 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 H3BUX3 64 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 BLCAPP62952 87 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 ETDBQ3ZM63 59 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 GAGE13Q4V321 117 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 FLNAP21333 2647 aaKnown RBP13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 C11orf86A6NJI1 115 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
PCDHA1-202ENST00000394633 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 POLR2KP53803 58 aaKnown RBP13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 DSCR9P59020 149 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 CD300EQ496F6 205 aaPredicted RBP13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 ZFP2Q6ZN57 461 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.21
PCDHA1-202ENST00000394633 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.22
PCDHA1-202ENST00000394633 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.22
PCDHA1-202ENST00000394633 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.22
PCDHA1-202ENST00000394633 MSMBP08118 114 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 EMP1P54849 157 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 Q5PR19 223 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 FAM159AQ6UWV7 190 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 WFDC12Q8WWY7 111 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 IGLV1-40P01703 118 aa13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 RPL39P62891 51 aaKnown RBP13.7□□□□□ -0.22
PCDHA1-202ENST00000394633 A0A087WWL8 130 aa13.69□□□□□ -0.22
PCDHA1-202ENST00000394633 UBE2D1P51668 147 aa13.69□□□□□ -0.22
PCDHA1-202ENST00000394633 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
PCDHA1-202ENST00000394633 BEX4Q9NWD9 120 aaPredicted RBP13.69□□□□□ -0.22
PCDHA1-202ENST00000394633 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
PCDHA1-202ENST00000394633 PMVKQ15126 192 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 MRPL16Q9NX20 251 aaKnown RBP13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 A6NJY4 79 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 AZU1P20160 251 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 DCANP1Q8TF63 244 aa13.68□□□□□ -0.22
PCDHA1-202ENST00000394633 TRAV12-3A0A0B4J271 114 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 GAGE12HA6NDE8 117 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 J3QR89 54 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 CD7P09564 240 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 VCYO14598 125 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 AVPP01185 164 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 PAPPA-AS1Q5QFB9 102 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 SIGMAR1Q99720 223 aa13.67□□□□□ -0.22
PCDHA1-202ENST00000394633 B4DSR2 109 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 F5H697 171 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 INSL3P51460 131 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 CFHR3Q02985 330 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 TMEM141Q96I45 108 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 A0A0J9YY99 117 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 TSPAN13O95857 204 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 ID1P41134 155 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 HERVK_113P61574 105 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 LRRC75A-AS1Q8N1F1 130 aa13.66□□□□□ -0.22
PCDHA1-202ENST00000394633 Q96MF0 132 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms