RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TEX36Q5VZQ5 186 aa10.64□□□□□ -0.71
USP49-203ENST00000394253 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
USP49-203ENST00000394253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
USP49-203ENST00000394253 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
USP49-203ENST00000394253 Q6P435 159 aa10.63□□□□□ -0.71
USP49-203ENST00000394253 EFNA2O43921 213 aa10.63□□□□□ -0.71
USP49-203ENST00000394253 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
USP49-203ENST00000394253 TNS1Q9HBL0 1735 aaKnown RBP10.63□□□□□ -0.71
USP49-203ENST00000394253 COL5A1P20908 1838 aaPredicted RBP10.62□□□□□ -0.71
USP49-203ENST00000394253 CPAMD8Q8IZJ3 1885 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 Q9HAA7 133 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 WIPF3A6NGB9 483 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 BLCAPP62952 87 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 TM2D2Q9BX73 214 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 IGKV1-12A0A0C4DH73 117 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 IGKV1D-12P01611 117 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 LYPD6Q86Y78 171 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 IGKV2D-26A0A0A0MRZ7 120 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 K7EM74 188 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 K7EQD1 137 aa10.62□□□□□ -0.71
USP49-203ENST00000394253 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 UBE2E1P51965 193 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 LYNX1G3V0Z9 82 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 ATP6V0E1O15342 81 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 LYNX1P0DP58 116 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 FXYD5Q96DB9 178 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 TFF1P04155 84 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
USP49-203ENST00000394253 TLN1Q9Y490 2541 aaKnown RBP10.61□□□□□ -0.71
USP49-203ENST00000394253 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
USP49-203ENST00000394253 CLEC2BQ92478 149 aa10.6□□□□□ -0.71
USP49-203ENST00000394253 SPRR3Q9UBC9 169 aa10.6□□□□□ -0.71
USP49-203ENST00000394253 MBD3L4A6NDZ8 208 aaPredicted RBP10.6□□□□□ -0.71
USP49-203ENST00000394253 MBD3L3A6NE82 208 aaPredicted RBP10.6□□□□□ -0.71
USP49-203ENST00000394253 MBD3L5A6NJ08 208 aaPredicted RBP10.6□□□□□ -0.71
USP49-203ENST00000394253 MBD3L2Q8NHZ7 208 aaPredicted RBP10.6□□□□□ -0.71
USP49-203ENST00000394253 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
USP49-203ENST00000394253 CCL18P55774 89 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 IGHV7-4-1A0A0J9YVY3 117 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 FXYD2P54710 66 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 COX7BP24311 80 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 Q6ZQT7 251 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 SERP2Q8N6R1 65 aa10.59□□□□□ -0.71
USP49-203ENST00000394253 QRFPP83859 136 aa10.58□□□□□ -0.72
USP49-203ENST00000394253 E9PLD3 99 aa10.58□□□□□ -0.72
USP49-203ENST00000394253 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
USP49-203ENST00000394253 IGLV3-12A0A075B6K2 115 aa10.58□□□□□ -0.72
USP49-203ENST00000394253 COA6Q5JTJ3 125 aaKnown RBP10.58□□□□□ -0.72
USP49-203ENST00000394253 EIF4EBP2Q13542 120 aaPredicted RBP10.58□□□□□ -0.72
USP49-203ENST00000394253 PIK3CD-AS1Q5SR53 167 aa10.58□□□□□ -0.72
USP49-203ENST00000394253 TEX49A0A1B0GTD5 131 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 GYPEP15421 78 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 A0A096LPF7 62 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 POLQO75417 2590 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 CENPVL3A0A0U1RRI6 287 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
USP49-203ENST00000394253 NDUFA11Q86Y39 141 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 TOMM6Q96B49 74 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 H3BUA1 57 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 COL18A1P39060 1754 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 WDR90Q96KV7 1748 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 C14orf177Q52M58 125 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 Q8N9L7 120 aa10.56□□□□□ -0.72
USP49-203ENST00000394253 Q6ZRM9 215 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 UNQ6494/PRO21346Q6UXR6 183 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 IGLV10-54A0A075B6I4 117 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 NCR3O14931 201 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 A0A087WV48 116 aa10.55□□□□□ -0.72
USP49-203ENST00000394253 GGNQ86UU5 652 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 FAM120AOSQ5T036 256 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 MSMBP08118 114 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR4Q16378 134 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 MIAQ16674 131 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 ENHOQ6UWT2 76 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 TCL1BO95988 128 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 DAND5Q8N907 189 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR20EP86478 221 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR20CP86479 221 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR20DP86480 221 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR20BP86481 221 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 PRR20AP86496 221 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 LRRC75A-AS1Q8N1F1 130 aa10.54□□□□□ -0.72
USP49-203ENST00000394253 IGHV4-59P01825 116 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
USP49-203ENST00000394253 CSRP2Q16527 193 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 IGHV1-69P01742 117 aa10.53□□□□□ -0.72
USP49-203ENST00000394253 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms