RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 TYMSP04818 313 aa7.89□□□□□ -1.15
PDGFD-202ENST00000393158 EGFEM1PQ0D2K5 195 aa7.89□□□□□ -1.15
PDGFD-202ENST00000393158 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
PDGFD-202ENST00000393158 IGLL1P15814 213 aa7.89□□□□□ -1.15
PDGFD-202ENST00000393158 CNFNQ9BYD5 112 aa7.89□□□□□ -1.15
PDGFD-202ENST00000393158 TRBV20-1A0A075B6N2 111 aa7.88□□□□□ -1.15
PDGFD-202ENST00000393158 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
PDGFD-202ENST00000393158 M0R2Z0 102 aa7.88□□□□□ -1.15
PDGFD-202ENST00000393158 SSBP4Q9BWG4 385 aaPredicted RBP7.88□□□□□ -1.15
PDGFD-202ENST00000393158 HIST1H1AQ02539 215 aaPredicted RBP7.88□□□□□ -1.15
PDGFD-202ENST00000393158 RPP21Q9H633 154 aaKnown RBP7.88□□□□□ -1.15
PDGFD-202ENST00000393158 SCRT2Q9NQ03 307 aa7.88□□□□□ -1.15
PDGFD-202ENST00000393158 TAX1BP3O14907 124 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 TCL1AP56279 114 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
PDGFD-202ENST00000393158 KCNIP4Q6PIL6 250 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 TSKUQ8WUA8 353 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 TP53TG3Q9ULZ0 132 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 TRAV12-2A0A075B6T6 113 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 CSN1S1P47710 185 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 FAM162BQ5T6X4 162 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
PDGFD-202ENST00000393158 TEX43Q6ZNM6 134 aa7.87□□□□□ -1.15
PDGFD-202ENST00000393158 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 SNRPD3P62318 126 aaKnown RBP7.86□□□□□ -1.15
PDGFD-202ENST00000393158 GATD1Q8NB37 220 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 ACTL10Q5JWF8 245 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 RBPMS2Q6ZRY4 209 aaKnown RBP7.86□□□□□ -1.15
PDGFD-202ENST00000393158 SH2D6Q7Z4S9 175 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 VCX2Q9H322 139 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 MGAM2Q2M2H8 2515 aa7.86□□□□□ -1.15
PDGFD-202ENST00000393158 PLAC8L1A1L4L8 177 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 CTRLP40313 264 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 SPINK13Q1W4C9 94 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 ETDBQ3ZM63 59 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 DYNLRB2Q8TF09 96 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 HIGD1CA8MV81 97 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 SPINK8P0C7L1 97 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 OXLD1Q5BKU9 147 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 C1orf158Q8N1D5 194 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 DAZAP1Q96EP5 407 aaKnown RBP7.85□□□□□ -1.15
PDGFD-202ENST00000393158 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 PF4P02776 101 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 SFTA2Q6UW10 78 aa7.85□□□□□ -1.15
PDGFD-202ENST00000393158 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 OR10J6PQ8NGY7 276 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 SNURFLB1AK76 121 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 K7EMI3 77 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 SPRY2O43597 315 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 INSL3P51460 131 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 OR4C46A6NHA9 309 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 TMEM136Q6ZRR5 245 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 TMEM158Q8WZ71 300 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 PPDPFQ9H3Y8 114 aa7.84□□□□□ -1.15
PDGFD-202ENST00000393158 PLECQ15149 4684 aaKnown RBP7.84□□□□□ -1.15
PDGFD-202ENST00000393158 HSBP1O75506 76 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 IGKV3-20P01619 116 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 FXYD7P58549 80 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 DEFB125Q8N687 156 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 MSRB1Q9NZV6 116 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 GNRH2O43555 120 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 NXPH4O95158 308 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 ARMS2P0C7Q2 107 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 LINC00310P59036 64 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 C9orf66Q5T8R8 295 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 C12orf54Q6X4T0 127 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 J3QR89 54 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 P01737 135 aa7.83□□□□□ -1.16
PDGFD-202ENST00000393158 RNASEKQ6P5S7 137 aaKnown RBP7.83□□□□□ -1.16
PDGFD-202ENST00000393158 IGHV4-4A0A075B6R2 117 aa7.82□□□□□ -1.16
PDGFD-202ENST00000393158 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
PDGFD-202ENST00000393158 OR10AG1Q8NH19 301 aa7.82□□□□□ -1.16
PDGFD-202ENST00000393158 LINC00467Q9BRT7 94 aa7.82□□□□□ -1.16
PDGFD-202ENST00000393158 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
PDGFD-202ENST00000393158 C9orf85Q96MD7 179 aa7.82□□□□□ -1.16
PDGFD-202ENST00000393158 GAS8-AS1O95177 125 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
PDGFD-202ENST00000393158 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 TRAV12-3A0A0B4J271 114 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 IGHV3-16A0A0C4DH30 117 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 LINC00315P59091 139 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 KPRPQ5T749 579 aaPredicted RBP7.81□□□□□ -1.16
PDGFD-202ENST00000393158 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
PDGFD-202ENST00000393158 LYZL1Q6UWQ5 148 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
PDGFD-202ENST00000393158 OR11H12B2RN74 326 aa7.8□□□□□ -1.16
PDGFD-202ENST00000393158 ZNF493Q6ZR52 646 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms