RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 LITAFQ99732 161 aa8.51□□□□□ -1.05
PDCD4-202ENST00000393104 ZNF876PQ49A33 203 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 TRPT1Q86TN4 253 aaKnown RBP8.5□□□□□ -1.05
PDCD4-202ENST00000393104 SRD5A1P18405 259 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 J3QR89 54 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 P0DMU3 169 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 PPDPFLQ8WWR9 84 aa8.5□□□□□ -1.05
PDCD4-202ENST00000393104 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
PDCD4-202ENST00000393104 COL6A6A6NMZ7 2263 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 OOSP1A8MZH6 123 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 UTP20O75691 2785 aaKnown RBP8.49□□□□□ -1.05
PDCD4-202ENST00000393104 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
PDCD4-202ENST00000393104 M0QXV9 152 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 ODF3Q96PU9 254 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 NCOR2Q9Y618 2525 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
PDCD4-202ENST00000393104 J3KRW8 73 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 ECSCRQ19T08 205 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 PRB1P04280 392 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 TGFAP01135 160 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 LMO4P61968 165 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 C10orf105Q8TEF2 133 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 VCX2Q9H322 139 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 TP53TG1Q9Y2A0 90 aa8.48□□□□□ -1.05
PDCD4-202ENST00000393104 CCL19Q99731 98 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 NACAE9PAV3 2078 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 TRAV4A0A0B4J268 109 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 LOC107984156A0A0G2JMH3 177 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 SUMO4Q6EEV6 95 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 ARL17AQ8IVW1 177 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 C5orf56Q8N8D9 126 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 NIPBLQ6KC79 2804 aaeCLIP8.47□□□□□ -1.05
PDCD4-202ENST00000393104 MINOS1Q5TGZ0 78 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 MINOS1-NBL1R4GNA1 71 aa8.47□□□□□ -1.05
PDCD4-202ENST00000393104 USP24Q9UPU5 2620 aa8.46□□□□□ -1.05
PDCD4-202ENST00000393104 KLLNB2CW77 178 aa8.46□□□□□ -1.05
PDCD4-202ENST00000393104 TRBV27A0A0K0K1C4 114 aa8.46□□□□□ -1.06
PDCD4-202ENST00000393104 PIMREGQ9BSJ6 248 aa8.46□□□□□ -1.06
PDCD4-202ENST00000393104 BEX4Q9NWD9 120 aaPredicted RBP8.46□□□□□ -1.06
PDCD4-202ENST00000393104 A4D1N5 150 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 TMEM223A0PJW6 202 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 RHODO00212 210 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 HIVEP3Q5T1R4 2406 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 ATRXP46100 2492 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 IGHV1-69DA0A0B4J2H0 117 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 PMVKQ15126 192 aa8.45□□□□□ -1.06
PDCD4-202ENST00000393104 TRBV7-1A0A0A6YYK4 115 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 SAA4P35542 130 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 TIMM17AQ99595 171 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
PDCD4-202ENST00000393104 PLA2G2AP14555 144 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDCD4-202ENST00000393104 Q6ZSV7 163 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 METTL26Q96S19 204 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 KMT2BQ9UMN6 2715 aaPredicted RBP8.43□□□□□ -1.06
PDCD4-202ENST00000393104 TRBV20-1A0A075B6N2 111 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 RNASE4P34096 147 aaKnown RBP8.43□□□□□ -1.06
PDCD4-202ENST00000393104 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 SCGB1D4Q6XE38 83 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 C9orf139Q6ZV77 190 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 C16orf92Q96LL3 132 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 SS18L2Q9UHA2 77 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 J3QQQ9 107 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 LGALS9O00182 355 aa8.43□□□□□ -1.06
PDCD4-202ENST00000393104 A0A096LNT2 108 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 M0R2P5 195 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 SLC25A20O43772 301 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 Q8N1Y9 231 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 IGSF10Q6WRI0 2623 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 TEX49A0A1B0GTD5 131 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 A6NJY4 79 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 M0QY20 66 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 MGPP08493 103 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
PDCD4-202ENST00000393104 MUSTN1Q8IVN3 82 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 Q9UF83 564 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 A0A087WWL8 130 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 BRI3O95415 125 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 IGHG2P01859 326 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 ASIPP42127 132 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 UBE2E1P51965 193 aa8.42□□□□□ -1.06
PDCD4-202ENST00000393104 ARL3P36405 182 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 EEF1AKMT3Q96AZ1 226 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms