RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 A0A087WWL8 130 aa11.01□□□□□ -0.65
PTPRK-208ENST00000392449 HIST1H2BAQ96A08 127 aa11.01□□□□□ -0.65
PTPRK-208ENST00000392449 DNAJC30Q96LL9 226 aa11.01□□□□□ -0.65
PTPRK-208ENST00000392449 DNAH8Q96JB1 4490 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 FAM162BQ5T6X4 162 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
PTPRK-208ENST00000392449 M0R381 172 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 UBE2G1P62253 170 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 LAGE3Q14657 143 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 CST9LP1Q5W188 147 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
PTPRK-208ENST00000392449 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-208ENST00000392449 A0A1B0GV50 99 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 FMC1Q96HJ9 113 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 NKX6-2Q9C056 277 aaPredicted RBP10.99□□□□□ -0.65
PTPRK-208ENST00000392449 ZFP30Q9Y2G7 519 aa10.99□□□□□ -0.65
PTPRK-208ENST00000392449 LTAP01374 205 aa10.98□□□□□ -0.65
PTPRK-208ENST00000392449 ZNF674Q2M3X9 581 aa10.98□□□□□ -0.65
PTPRK-208ENST00000392449 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
PTPRK-208ENST00000392449 PHLDA3Q9Y5J5 127 aa10.98□□□□□ -0.65
PTPRK-208ENST00000392449 DMBT1Q9UGM3 2413 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-208ENST00000392449 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-208ENST00000392449 PAGE4O60829 102 aa10.97□□□□□ -0.65
PTPRK-208ENST00000392449 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
PTPRK-208ENST00000392449 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
PTPRK-208ENST00000392449 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
PTPRK-208ENST00000392449 RHODO00212 210 aa10.96□□□□□ -0.65
PTPRK-208ENST00000392449 TPT1P13693 172 aaKnown RBP10.96□□□□□ -0.65
PTPRK-208ENST00000392449 AKR1C3P42330 323 aa10.96□□□□□ -0.65
PTPRK-208ENST00000392449 RPL19P84098 196 aaKnown RBP10.96□□□□□ -0.65
PTPRK-208ENST00000392449 LINC01620Q4KN68 170 aa10.96□□□□□ -0.65
PTPRK-208ENST00000392449 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
PTPRK-208ENST00000392449 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
PTPRK-208ENST00000392449 A0A087WWC5 75 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 SCO2A0A1W2PP80 73 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 NIT1Q86X76 327 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
PTPRK-208ENST00000392449 MUC21A0A0G2JKD1 596 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 MUC21A0A140T8X8 626 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 FAM229AH3BQW9 127 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 ZFP82Q8N141 532 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 SFT2D1Q8WV19 159 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 OR10AG1Q8NH19 301 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
PTPRK-208ENST00000392449 TCEAL7Q9BRU2 100 aa10.92□□□□□ -0.66
PTPRK-208ENST00000392449 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 UBE2D3P61077 147 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 SSTP61278 116 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 UBE2D2P62837 147 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 TOR2AQ5JU69 321 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 UBE2WQ96B02 151 aa10.91□□□□□ -0.66
PTPRK-208ENST00000392449 ZNF345Q14585 488 aa10.9□□□□□ -0.66
PTPRK-208ENST00000392449 Q6ZSA8 131 aa10.9□□□□□ -0.66
PTPRK-208ENST00000392449 MBD3L1Q8WWY6 194 aa10.9□□□□□ -0.66
PTPRK-208ENST00000392449 ZNF471Q9BX82 626 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-208ENST00000392449 SEC11BP0C7V7 166 aa10.89□□□□□ -0.67
PTPRK-208ENST00000392449 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
PTPRK-208ENST00000392449 ZNF56Q15929 161 aa10.89□□□□□ -0.67
PTPRK-208ENST00000392449 PRR27Q6MZM9 219 aa10.89□□□□□ -0.67
PTPRK-208ENST00000392449 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
PTPRK-208ENST00000392449 MLST8Q9BVC4 326 aa10.89□□□□□ -0.67
PTPRK-208ENST00000392449 TRBV7-3A0A075B6L6 115 aa10.88□□□□□ -0.67
PTPRK-208ENST00000392449 A0A087WX48 190 aa10.88□□□□□ -0.67
PTPRK-208ENST00000392449 TRBV10-1A0A0K0K1A3 114 aa10.88□□□□□ -0.67
PTPRK-208ENST00000392449 BAGE2Q86Y30 109 aa10.88□□□□□ -0.67
PTPRK-208ENST00000392449 NEXN-AS1Q8NBZ9 246 aa10.88□□□□□ -0.67
PTPRK-208ENST00000392449 BCL2L11O43521 198 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 C1QBP02746 253 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 RBFOX3A6NFN3 312 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 UMAD1C9J7I0 102 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 PFDN1O60925 122 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 OR10G8Q8NGN5 311 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 RMI2Q96E14 147 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 DERL1Q9BUN8 251 aa10.87□□□□□ -0.67
PTPRK-208ENST00000392449 TMEM262E9PQX1 116 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 H2AFB1P0C5Y9 115 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 RAB4BP61018 213 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 CCL20P78556 96 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 MPV17L2Q567V2 206 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 COX11Q9Y6N1 276 aa10.86□□□□□ -0.67
PTPRK-208ENST00000392449 TRBV6-8A0A0A6YYG3 113 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 KANTRA0A1W2PQU2 76 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 HMSDA8MTL9 139 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 SNAI2O43623 268 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 S100A9P06702 114 aaKnown RBP10.85□□□□□ -0.67
PTPRK-208ENST00000392449 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
PTPRK-208ENST00000392449 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 TMUB2Q71RG4 321 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 SCXQ7RTU7 201 aa10.85□□□□□ -0.67
PTPRK-208ENST00000392449 C15orf54Q8N8G6 183 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms