RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PRSS1P07477 247 aa7.33□□□□□ -1.24
COL6A3-204ENST00000392003 COX8AP10176 69 aa7.33□□□□□ -1.24
COL6A3-204ENST00000392003 Q6ZQT7 251 aa7.33□□□□□ -1.24
COL6A3-204ENST00000392003 DNAJC30Q96LL9 226 aa7.33□□□□□ -1.24
COL6A3-204ENST00000392003 CRYBG3Q68DQ2 2970 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 TRAV4A0A0B4J268 109 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 FCER1GP30273 86 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 RHPN1-AS1Q9BWJ2 59 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 IGHV4-59P01825 116 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 DEFB113Q30KQ7 82 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 TMEM160Q9NX00 188 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 PRO0461Q9UI25 63 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 IGHV7-4-1A0A0J9YVY3 117 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 ASIPP42127 132 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 C4orf26Q17RF5 130 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 Q8N8P6 123 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 TMEM101Q96IK0 257 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 Q96MF0 132 aa7.32□□□□□ -1.24
COL6A3-204ENST00000392003 DAZ1Q9NQZ3 744 aaKnown RBP7.32□□□□□ -1.24
COL6A3-204ENST00000392003 MYO9AB2RTY4 2548 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 ABCA2Q9BZC7 2435 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 FGF6P10767 208 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 FXYD2P54710 66 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 HRCT1Q6UXD1 115 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 LCNL1Q6ZST4 164 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
COL6A3-204ENST00000392003 CHD6Q8TD26 2715 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 A0A1W2PRX2 142 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 RHODO00212 210 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 GATA1P15976 413 aaPredicted RBP7.31□□□□□ -1.24
COL6A3-204ENST00000392003 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 PSMG4Q5JS54 123 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 MYOZ3Q8TDC0 251 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 BEX4Q9NWD9 120 aaPredicted RBP7.31□□□□□ -1.24
COL6A3-204ENST00000392003 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
COL6A3-204ENST00000392003 C9JAW5 83 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 M0R381 172 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 ATP5LO75964 103 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 RNASE4P34096 147 aaKnown RBP7.3□□□□□ -1.24
COL6A3-204ENST00000392003 LINC01587Q99440 93 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 IGLV1-40P01703 118 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 TMEM158Q8WZ71 300 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 RASL10AQ92737 203 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
COL6A3-204ENST00000392003 IGHV4-4A0A075B6R2 117 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 SMIM13P0DJ93 91 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 GCSHP23434 173 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 Q6ZS46 218 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 PSMG3-AS1Q96PY0 264 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 IFITM1P13164 125 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 NMUP48645 174 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
COL6A3-204ENST00000392003 LAGE3Q14657 143 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 PRR9Q5T870 116 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 K7EMT4 169 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 GPHB5Q86YW7 130 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 CARD19Q96LW7 228 aa7.29□□□□□ -1.24
COL6A3-204ENST00000392003 SOCS3O14543 225 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 SRD5A1P18405 259 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 FOXC2Q99958 501 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 TRAV26-2A0A0B4J265 109 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 J3QKU1 62 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 EMP1P54849 157 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 GAGE2EQ4V326 116 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 KHDC1LQ5JSQ8 128 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 OR9G4Q8NGQ1 327 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 GAGE2DQ9UEU5 116 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 F6UB75 175 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 MGPP08493 103 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 HIST2H2BCQ6DN03 193 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 NHP2Q9NX24 153 aaKnown RBP7.28□□□□□ -1.24
COL6A3-204ENST00000392003 DKK2Q9UBU2 259 aa7.28□□□□□ -1.24
COL6A3-204ENST00000392003 DEFB1P60022 68 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 CHCHD5Q9BSY4 110 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 IGKCP01834 107 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 IGHV4-31P0DP07 118 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
COL6A3-204ENST00000392003 PCP2Q8IVA1 136 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 TTTY13Q9BZ97 58 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 ZNF580Q9UK33 172 aa7.27□□□□□ -1.25
COL6A3-204ENST00000392003 DPM2O94777 84 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 NRACQ8N912 160 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 PHLDA1Q8WV24 401 aaPredicted RBP7.26□□□□□ -1.25
COL6A3-204ENST00000392003 AGRNO00468 2067 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 TMEM89A2RUT3 159 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 PPP1R17O96001 155 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 CFHR3Q02985 330 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms