RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DNAH10OSP0CZ25 163 aa8.66□□□□□ -1.02
GGPS1-203ENST00000391855 RPL19P84098 196 aaKnown RBP8.66□□□□□ -1.02
GGPS1-203ENST00000391855 ZNF575Q86XF7 245 aa8.66□□□□□ -1.02
GGPS1-203ENST00000391855 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
GGPS1-203ENST00000391855 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 XKRY2A2RUG3 117 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 IGLV2-8P01709 118 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 EVI2AP22794 236 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 NFE4Q86UQ8 179 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 C10orf126Q8N4M7 172 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 LYPD6BQ8NI32 183 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 HECTD4Q9Y4D8 3996 aa8.65□□□□□ -1.02
GGPS1-203ENST00000391855 TRBV10-1A0A0K0K1A3 114 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
GGPS1-203ENST00000391855 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
GGPS1-203ENST00000391855 LINC00315P59091 139 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 LELP1Q5T871 98 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 JPT2Q9H910 190 aa8.64□□□□□ -1.03
GGPS1-203ENST00000391855 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 C19orf71A6NCJ1 209 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 P01737 135 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 CRYGDP07320 174 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 SPANXN1Q5VSR9 72 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 OR2D3Q8NGH3 330 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 OR10AG1Q8NH19 301 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 A0A087WWC5 75 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 A0A087WWL8 130 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 IGHV3-38A0A0C4DH36 116 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 GAGE1Q13065 139 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 GAGE4Q13068 117 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 GAGE5Q13069 117 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 LINC01556Q5JQF7 62 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
GGPS1-203ENST00000391855 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
GGPS1-203ENST00000391855 RAB4BP61018 213 aa8.62□□□□□ -1.03
GGPS1-203ENST00000391855 CACNG7P62955 275 aa8.62□□□□□ -1.03
GGPS1-203ENST00000391855 Q6ZSN1 163 aa8.62□□□□□ -1.03
GGPS1-203ENST00000391855 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
GGPS1-203ENST00000391855 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
GGPS1-203ENST00000391855 SMIM17P0DL12 118 aa8.61□□□□□ -1.03
GGPS1-203ENST00000391855 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
GGPS1-203ENST00000391855 ZNF56Q15929 161 aa8.61□□□□□ -1.03
GGPS1-203ENST00000391855 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
GGPS1-203ENST00000391855 DNAH11Q96DT5 4516 aa8.6□□□□□ -1.03
GGPS1-203ENST00000391855 F2Z2F3 143 aa8.6□□□□□ -1.03
GGPS1-203ENST00000391855 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
GGPS1-203ENST00000391855 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
GGPS1-203ENST00000391855 OR10G8Q8NGN5 311 aa8.6□□□□□ -1.03
GGPS1-203ENST00000391855 MSRB1Q9NZV6 116 aa8.6□□□□□ -1.03
GGPS1-203ENST00000391855 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
GGPS1-203ENST00000391855 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
GGPS1-203ENST00000391855 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
GGPS1-203ENST00000391855 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 EREGO14944 169 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 TRGC1P0CF51 173 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 ERVFC1-1P60608 527 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.58□□□□□ -1.04
GGPS1-203ENST00000391855 NUDT10Q8NFP7 164 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 NUDT11Q96G61 164 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 TPPP3Q9BW30 176 aa8.58□□□□□ -1.04
GGPS1-203ENST00000391855 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
GGPS1-203ENST00000391855 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 GZMBP10144 247 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 CTRLP40313 264 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 UBE2D3P61077 147 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 UBE2D2P62837 147 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 LAGE3Q14657 143 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 WDR73Q6P4I2 378 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 KIF25-AS1Q9Y6Z4 181 aa8.57□□□□□ -1.04
GGPS1-203ENST00000391855 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 F5H697 171 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 H7C1H1 209 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 K7EN84 100 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 GHRHP01286 108 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 PKD1P98161 4303 aa8.56□□□□□ -1.04
GGPS1-203ENST00000391855 C16orf90A8MZG2 172 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 CEBPGP53567 150 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 TMEM97Q5BJF2 176 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 Q9UF83 564 aa8.55□□□□□ -1.04
GGPS1-203ENST00000391855 GATCO43716 136 aaKnown RBP8.54□□□□□ -1.04
GGPS1-203ENST00000391855 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms